RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 OR10A6Q8NH74 314 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 STAG3L4Q8TBR4 150 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 MCOLN3Q8TDD5 553 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 HTRA1Q92743 480 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 RPL3LQ92901 407 aaKnown RBP12.21□□□□□ -0.45
PCM1-203ENST00000517545 FUBP1Q96AE4 644 aaKnown RBP12.21□□□□□ -0.45
PCM1-203ENST00000517545 AARSD1Q9BTE6 412 aaKnown RBP12.21□□□□□ -0.45
PCM1-203ENST00000517545 TBCDQ9BTW9 1192 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 EHD1Q9H4M9 534 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 TMLHEQ9NVH6 421 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 ZIM2Q9NZV7 527 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 ZNF229Q9UJW7 825 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 PCTPQ9UKL6 214 aa12.21□□□□□ -0.45
PCM1-203ENST00000517545 RHOBTB1O94844 696 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 UROSP10746 265 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 PCYT1AP49585 367 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 HTR6P50406 440 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 RAPSNQ13702 412 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 LAIR1Q6GTX8 287 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 PGBD5Q8N414 524 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 PSMA8Q8TAA3 256 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 ADGRE2Q9UHX3 823 aa12.21□□□□□ -0.46
PCM1-203ENST00000517545 PNMA8BQ9ULN7 279 aaPredicted RBP12.21□□□□□ -0.46
PCM1-203ENST00000517545 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 SMPD1P17405 629 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 PFKLP17858 780 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 TCEA1P23193 301 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 ARL1P40616 181 aaPredicted RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 IL5RAQ01344 420 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CDK5R2Q13319 367 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 GALNT3Q14435 633 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 HIST2H2ACQ16777 129 aaPredicted RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 MARC1Q5VT66 337 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 ZNF691Q5VV52 312 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 DNAJC14Q6Y2X3 702 aaPredicted RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 CCDC80Q76M96 950 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 GALNT5Q7Z7M9 940 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 DPP10Q8N608 796 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 PSMG2Q969U7 264 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 SLC47A1Q96FL8 570 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 ACTR8Q9H981 624 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 MAGEE1Q9HCI5 957 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 FBXO8Q9NRD0 319 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
PCM1-203ENST00000517545 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 INTS6Q9UL03 887 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 TTC3P53804 2025 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 BTN3A1O00481 513 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 PRKD3O94806 890 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CHEK2O96017 543 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 FTH1P02794 183 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CYP2C18P33260 490 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 LHX1P48742 406 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 MRPL19P49406 292 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 RENBPP51606 427 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 DGUOKQ16854 277 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 NECAB2Q7Z6G3 386 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 TTC16Q8NEE8 873 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 OR2T12Q8NG77 320 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 DYNC2LI1Q8TCX1 351 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 RORBQ92753 470 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 RDH12Q96NR8 316 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 RBM4BQ9BQ04 359 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 RTP3Q9BQQ7 232 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 RBM4Q9BWF3 364 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 SPC25Q9HBM1 224 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 ERVK-11Q9UQG0 969 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 POLR2AP24928 1970 aaKnown RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 TTC34A8MYJ7 566 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 FZD9O00144 591 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 PRMT5O14744 637 aaPredicted RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 GSTA4O15217 222 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 SLC22A1O15245 554 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 SMIM10L2AP0DMW4 78 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 SMIM10L2BP0DMW5 78 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CYP4B1P13584 511 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 HK3P52790 923 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 MRNIPQ6NTE8 343 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 PAGE2Q7Z2X7 111 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CTRCQ99895 268 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 TPK1Q9H3S4 243 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 SP110Q9HB58 689 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CSNK1G1Q9HCP0 422 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
PCM1-203ENST00000517545 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 TMEFF2Q9UIK5 374 aaPredicted RBP12.2□□□□□ -0.46
PCM1-203ENST00000517545 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 PSMD11O00231 422 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 MGEA5O60502 916 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 ANGPTL1O95841 491 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 PSMB9P28065 219 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms