RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ITLN1Q8WWA0 313 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 SNAPC3Q92966 411 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 TRIM63Q969Q1 353 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 PHF21AQ96BD5 680 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 RHBDF1Q96CC6 855 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 CNRIP1Q96F85 164 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 OXNAD1Q96HP4 312 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 DGAT2Q96PD7 388 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 LRRCC1Q9C099 1032 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 LRMDAQ9H2I8 198 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 ACAD9Q9H845 621 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 MYOZ1Q9NP98 299 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D23Q9NUY8 699 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 TMOD4Q9NZQ9 345 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 KLHL9Q9P2J3 617 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 RCOR1Q9UKL0 485 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 MOKQ9UQ07 419 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 ROS1P08922 2347 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 PLXNB1O43157 2135 aa-0.98□□□□□ -2.57
RNU6-542P-201ENST00000516405 CABIN1Q9Y6J0 2220 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 FAM90A20PA6NIJ5 464 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 NPIPB13A6NJU9 1138 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZFP92A6NM28 416 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 TSC22D2O75157 780 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 COQ9O75208 318 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 DAB1O75553 588 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 OFD1O75665 1012 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 CCNDBP1O95273 360 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 CBX6O95503 412 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 LYL1P12980 280 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SLC7A1P30825 629 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 CDH5P33151 784 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SKIV2L2P42285 1042 aaKnown RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 PIK3CAP42336 1068 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 PTPN9P43378 593 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 PAX5Q02548 391 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 RPE65Q16518 533 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SGCBQ16585 318 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 DUOXA1Q1HG43 343 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 GRAMD1BQ3KR37 738 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SPECC1Q5M775 1068 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 OTPQ5XKR4 325 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 AADACL2Q6P093 401 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 KCTD18Q6PI47 426 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 CRTC1Q6UUV9 634 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 B3GNT9Q6UX72 402 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 HMGN2P46Q86SG4 172 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 MAP7D3Q8IWC1 876 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SCN4BQ8IWT1 228 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 DHX40Q8IX18 779 aaKnown RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 FBXO16Q8IX29 292 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 C4orf32Q8N8J7 132 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SCCPDHQ8NBX0 429 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 OR4Q3Q8NH05 313 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 RMI2Q96E14 147 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 SMR3AQ99954 134 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 TRAIPQ9BWF2 469 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 TRIM31Q9BZY9 425 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 DDX4Q9NQI0 724 aaKnown RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 ATP8A2Q9NTI2 1148 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 B3GAT1Q9P2W7 334 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 CA14Q9ULX7 337 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 CDK11AQ9UQ88 783 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 LRP4O75096 1905 aa-0.99□□□□□ -2.57
RNU6-542P-201ENST00000516405 KAT6BQ8WYB5 2073 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 DOCK9Q9BZ29 2069 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 FLNCQ14315 2725 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3DA0A087WVF3 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3IA0A087WXS9 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3EA0A087X179 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3KA0A087X1G2 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3BA6NDS4 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3FA6NER0 549 aaPredicted RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 B4DXG7 233 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3LB9A6J9 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 G3V2L1 256 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TO15178 435 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 GPR39O43194 453 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 NBNO60934 754 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF253O75346 499 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 RBBP9O75884 186 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 KRT38O76015 456 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 UFL1O94874 794 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 CER1O95813 267 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 IL1AP01583 271 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 PRH1P02810 166 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 LIPFP07098 398 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3HP0C7X1 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 MYCLP1P12525 358 aaPredicted RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 GP1BBP13224 206 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 HTR1FP30939 366 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 RYKP34925 604 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 GGT5P36269 586 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 NUDT1P36639 197 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 RPL34P49207 117 aaKnown RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 EFNA3P52797 238 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 DCDC1P59894 354 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TNFRSF9Q07011 255 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 MS4A18Q3C1V0 323 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 BRDTQ58F21 947 aaPredicted RBP-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms