RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 SERINC1Q9NRX5 453 aa0.14□□□□□ -2.39
SCARNA23-201ENST00000516060 HOMER2Q9NSB8 354 aa0.14□□□□□ -2.39
SCARNA23-201ENST00000516060 DACT1Q9NYF0 836 aa0.14□□□□□ -2.39
SCARNA23-201ENST00000516060 NDUFAF4Q9P032 175 aa0.14□□□□□ -2.39
SCARNA23-201ENST00000516060 LSM4Q9Y4Z0 139 aaKnown RBP0.14□□□□□ -2.39
SCARNA23-201ENST00000516060 LOC105371242A0A075B767 164 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 PABPN1LA6NDY0 278 aaKnown RBP0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 PANO1I0J062 215 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 HS3ST1O14792 307 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 ALDH1L1O75891 902 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 BCL10O95999 233 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 U2AF1L5P0DN76 240 aaPredicted RBP0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 PRIM2P49643 509 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 HERV-K104P61576 105 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 U2AF1Q01081 240 aaKnown RBP eCLIP0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 LGALS3BPQ08380 585 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 MFAP5Q13361 173 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 PTK2BQ14289 1009 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 GALEQ14376 348 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 GRM3Q14832 879 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 RAB6CQ53S08 254 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 ZSCAN25Q6NSZ9 544 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 CDHR3Q6ZTQ4 885 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM131BQ86XD5 332 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 PTOV1Q86YD1 416 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 METTL4Q8N3J2 472 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 SCAMP5Q8TAC9 235 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 RNF138Q8WVD3 245 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 BRI3BPQ8WY22 251 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 STARD4Q96DR4 205 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM122AQ96E09 287 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 CFAP57Q96MR6 1250 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 CHCHD5Q9BSY4 110 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 BRINP2Q9C0B6 783 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 RAB6CQ9H0N0 254 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 LMAN2LQ9H0V9 348 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 SLC32A1Q9H598 525 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 STARD7Q9NQZ5 370 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 CTNNAL1Q9UBT7 734 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 GTF3C4Q9UKN8 822 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 POGZQ7Z3K3 1410 aa0.13□□□□□ -2.39
SCARNA23-201ENST00000516060 GON4LQ3T8J9 2241 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 SEPT4O43236 478 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 DFNA5O60443 496 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 B4GALT2O60909 372 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 IGKV1-17P01599 117 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 VDRP11473 427 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 SORDQ00796 357 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 GOLGA8FQ08AF8 430 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 OS9Q13438 667 aaPredicted RBP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM182AQ5T1J6 154 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 IRGCQ6NXR0 463 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 PAPD4Q6PIY7 484 aaKnown RBP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM160B2Q86V87 743 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 ZFAND4Q86XD8 727 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 SUGP1Q8IWZ8 645 aaKnown RBP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 KTI12Q96EK9 354 aaPredicted RBP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 SLC41A2Q96JW4 573 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM110AQ9BQ89 295 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 PANK2Q9BZ23 570 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 BPIFA1Q9NP55 256 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 ACSS1Q9NUB1 689 aaPredicted RBP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 THAP10Q9P2Z0 257 aaPredicted RBP0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 SLC39A10Q9ULF5 831 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 SLC7A7Q9UM01 511 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 ERVK-11Q9UQG0 969 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 PLEKHA6Q9Y2H5 1048 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 KMT2DO14686 5537 aa0.12□□□□□ -2.39
SCARNA23-201ENST00000516060 TFECO14948 347 aaPredicted RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 NCK2O43639 380 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 SNAP91O60641 907 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 PLA2G6O60733 806 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 PQBP1O60828 265 aaKnown RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 BMP10O95393 424 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 MT-CYBP00156 380 aaPredicted RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 PMELP40967 661 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 HSPA7P48741 367 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 KHKP50053 298 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 PNLIPRP1P54315 467 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 NAE1Q13564 534 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 SF3A2Q15428 464 aaKnown RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 DCAF10Q5QP82 559 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 SERTAD4-AS1Q5TG53 156 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 LYSMD4Q5XG99 296 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 SIGIRRQ6IA17 410 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 PQLC2Q6ZP29 291 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 BTN2A1Q7KYR7 527 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 SYT13Q7L8C5 426 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 HAUS6Q7Z4H7 955 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 ABI3BPQ7Z7G0 1075 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 SLC44A2Q8IWA5 706 aaPredicted RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 DHX40Q8IX18 779 aaKnown RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 GPALPP1Q8IXQ4 340 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 MYCT1Q8N699 235 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 NIPA2Q8N8Q9 360 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 LINS1Q8NG48 757 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 STYXQ8WUJ0 223 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 RAB40AQ8WXH6 277 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 HSD17B8Q92506 261 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms