RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 NLGN4XQ8N0W4 816 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 NXPE1Q8N323 547 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 IL22RA1Q8N6P7 574 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 EXD3Q8N9H8 876 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 FAM71DQ8N9W8 422 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 SPC24Q8NBT2 197 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 NLGN4YQ8NFZ3 816 aaPredicted RBP10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC35B2Q8TB61 432 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 EXTL1Q92935 676 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 ULK4Q96C45 1275 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 LRRC45Q96CN5 670 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 LINC00615Q96LM1 132 aaPredicted RBP10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC12A9Q9BXP2 914 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 LRRC40Q9H9A6 602 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 SEMA5BQ9P283 1151 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 CRLS1Q9UJA2 301 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 PSMD13Q9UNM6 376 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 UNC13CQ8NB66 2214 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 IGLV3-16A0A075B6K0 115 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 TRBV5-4A0A0C4DH59 114 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 TCRBV7S2A1N4TA0A589 114 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 H7C0S8 307 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 POLR1CO15160 346 aaPredicted RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 KIF1CO43896 1103 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 RASSF9O75901 435 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 STK17BO94768 372 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 AP2A1O95782 977 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 PTMAP06454 111 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 ITGALP20701 1170 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 MAP4P27816 1152 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 PRLHRP49683 370 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 PPP1CAP62136 330 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 CYP4F2P78329 520 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 TMPRSS15P98073 1019 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 MAP7Q14244 749 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 TBR1Q16650 682 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 IRGCQ6NXR0 463 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 TIPARPQ7Z3E1 657 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 NAT14Q8WUY8 206 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 KLHL6Q8WZ60 621 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 ZDHHC12Q96GR4 267 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 INSM2Q96T92 566 aaPredicted RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 TMEM121Q9BTD3 319 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 IMP3Q9NV31 184 aaKnown RBP10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 ACSL5Q9ULC5 683 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
HMGXB3-205ENST00000514469 LOC101059948A0A1B0GTJ6 334 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 OR5K3A6NET4 321 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 GOLGA6L3A6NEY3 463 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 CFAP99D6REC4 459 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 CCL22O00626 93 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 RALBP11234 206 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ATP1B2P14415 290 aaPredicted RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 NELFEP18615 380 aaKnown RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 PSMA3P25788 255 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ACRV1P26436 265 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 MC4RP32245 332 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 STAT5AP42229 794 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 SEPHS1P49903 392 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 SH3BP2P78314 561 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 FOXM1Q08050 763 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ABHD18Q0P651 414 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 IL11RAQ14626 422 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 PLCL1Q15111 1095 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 OASLQ15646 514 aaKnown RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 GPR33Q49SQ1 333 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF658BQ4V348 819 aaPredicted RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 CACHD1Q5VU97 1274 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 DUS1LQ6P1R4 473 aaKnown RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 KLHL35Q6PF15 583 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 FAM92BQ6ZTR7 304 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF605Q86T29 641 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 LILRA3Q8N6C8 439 aaPredicted RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 HM13Q8TCT9 377 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 HEXDCQ8WVB3 486 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ZFPM2Q8WW38 1151 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 ATG4AQ8WYN0 398 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 DCUN1D1Q96GG9 259 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC45A3Q96JT2 553 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC41A2Q96JW4 573 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 RMDN2Q96LZ7 410 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 C12orf66Q96MD2 445 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 COPS8Q99627 209 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 TSGA10Q9BZW7 698 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 TRIT1Q9H3H1 467 aaKnown RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 FAM96AQ9H5X1 160 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 KIR3DX1Q9H7L2 352 aa10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 NLE1Q9NVX2 485 aaPredicted RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 CFAP20Q9Y6A4 193 aaKnown RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 FASNP49327 2511 aaKnown RBP10.22□□□□□ -0.77
HMGXB3-205ENST00000514469 IGHV5-51A0A0C4DH38 117 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 C17orf113A0A1B0GUU1 675 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 TLCD2A6NGC4 264 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 MROH6A6NGR9 719 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF891A8MT65 544 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 GOLGA6L6A8MZA4 724 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms