RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 OR51F1A6NGY5 319 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 OR52A4PA6NMU1 304 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 E7EVH7 732 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 NVLO15381 856 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 PHF2O75151 1096 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 KRT37O76014 449 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 GOT2P00505 430 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 KRT14P02533 472 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 MLNP12872 115 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 TCP1P17987 556 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 VCLP18206 1134 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 IVDP26440 423 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 PTGIRP43119 386 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 ARCN1P48444 511 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 DRG2P55039 364 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 RPE65Q16518 533 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 AMZ1Q400G9 498 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 C3orf38Q5JPI3 329 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 ANKRD22Q5VYY1 191 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 CCDC137Q6PK04 289 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 CERS6Q6ZMG9 384 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 PPP1R21Q6ZMI0 780 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 GSTA5Q7RTV2 222 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 ZNF761Q86XN6 746 aaPredicted RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 AGGF1Q8N302 714 aaeCLIP9.51□□□□□ -0.89
RNF4-221ENST00000513643 FBXO39Q8N4B4 442 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 LILRA3Q8N6C8 439 aaPredicted RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 CLDN19Q8N6F1 224 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 BMPERQ8N8U9 685 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 NAT8LQ8N9F0 302 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 OR10G6Q8NH81 332 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 ANP32BQ92688 251 aaKnown RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 SLC38A3Q99624 504 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 TBC1D10AQ9BXI6 508 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 SPRY4Q9C004 299 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 STRADBQ9C0K7 418 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 OR52A5Q9H2C5 316 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 PCYOX1Q9UHG3 505 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 PCDHGA3Q9Y5H0 932 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 PRSS21Q9Y6M0 314 aa9.51□□□□□ -0.89
RNF4-221ENST00000513643 MN1Q10571 1320 aaPredicted RBP9.51□□□□□ -0.89
RNF4-221ENST00000513643 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.5□□□□□ -0.89
RNF4-221ENST00000513643 CFAP99D6REC4 459 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 TOX3O15405 576 aaPredicted RBP9.5□□□□□ -0.89
RNF4-221ENST00000513643 TMEM63AO94886 807 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 TNFSF15O95150 251 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 GAS8O95995 478 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 VIPP01282 170 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 ANKRD34CP0C6C1 535 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 RALBP11234 206 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 FGF3P11487 239 aaPredicted RBP9.5□□□□□ -0.89
RNF4-221ENST00000513643 MTHFD1P11586 935 aaKnown RBP9.5□□□□□ -0.89
RNF4-221ENST00000513643 AKT1P31749 480 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 ETV5P41161 510 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 NSG1P42857 185 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 CD151P48509 253 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 BASP1P80723 227 aaKnown RBP9.5□□□□□ -0.89
RNF4-221ENST00000513643 GPS1Q13098 491 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 RPA4Q13156 261 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 CBLBQ13191 982 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 SEPT6Q14141 434 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 GPR18Q14330 331 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 SEMA3AQ14563 771 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 ZRANB3Q5FWF4 1079 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 LYPLAL1Q5VWZ2 237 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 AFTPHQ6ULP2 937 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 DET1Q7L5Y6 550 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 TMEM135Q86UB9 458 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 DTX1Q86Y01 620 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
RNF4-221ENST00000513643 GPR150Q8NGU9 434 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 OR4L1Q8NH43 312 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 HM13Q8TCT9 377 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 DCUN1D1Q96GG9 259 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 CCDC74BQ96LY2 380 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 RMDN2Q96LZ7 410 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 CMKLR1Q99788 373 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 CCM2Q9BSQ5 444 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 OSGEPL1Q9H4B0 414 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 EPB41L5Q9HCM4 733 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 THSD1Q9NS62 852 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 BFARQ9NZS9 450 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 LOXL2Q9Y4K0 774 aa9.5□□□□□ -0.89
RNF4-221ENST00000513643 SLC5A10A0PJK1 596 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 CCDC78A2IDD5 438 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 PDZK1P1A8MUH7 402 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 B4E171 279 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 C9orf172C9J069 976 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 TP73O15350 636 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 DUX1O43812 170 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 OR1I1O60431 355 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 AVILO75366 819 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 UBXN7O94888 489 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 CCL4P13236 92 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 HGFP14210 728 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 MGAT1P26572 445 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 ACADLP28330 430 aa9.49□□□□□ -0.89
RNF4-221ENST00000513643 NMBRP28336 390 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms