RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ARHGAP8P85298 464 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 PPARDQ03181 441 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
PDPN-210ENST00000513143 SH2D5Q6ZV89 423 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 OTOAQ7RTW8 1153 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 CCDC91Q7Z6B0 441 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 RABEPKQ7Z6M1 372 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 PIM3Q86V86 326 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 AMZ2Q86W34 360 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
PDPN-210ENST00000513143 PRSS33Q8NF86 280 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 OR2L2Q8NH16 312 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 ACMSDQ8TDX5 336 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 INPP5DQ92835 1189 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 FAM136AQ96C01 138 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 TIMM29Q9BSF4 260 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 STMN4Q9H169 189 aaPredicted RBP12.32□□□□□ -0.44
PDPN-210ENST00000513143 CENPHQ9H3R5 247 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 CARS2Q9HA77 564 aaKnown RBP12.32□□□□□ -0.44
PDPN-210ENST00000513143 SLC23A2Q9UGH3 650 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 KLF15Q9UIH9 416 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 TRMT6Q9UJA5 497 aaKnown RBP12.32□□□□□ -0.44
PDPN-210ENST00000513143 ANKRD6Q9Y2G4 727 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 VPS13AQ96RL7 3174 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 TMEM131Q92545 1883 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 A0A1B0GVT2 93 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 PHGDHO43175 533 aaKnown RBP12.31□□□□□ -0.44
PDPN-210ENST00000513143 GPC4O75487 556 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 EPN2O95208 641 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 MPOP05164 745 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 C2P06681 752 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 SLC35E2BP0CK96 405 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 PBLDP30039 288 aaPredicted RBP12.31□□□□□ -0.44
PDPN-210ENST00000513143 BLKP51451 505 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 DMPKQ09013 629 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 LRP8Q14114 963 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 GBX1Q14549 363 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ZNF460Q14592 562 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 DUOXA1Q1HG43 343 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 PLA2G4EQ3MJ16 856 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 TTLL9Q3SXZ7 439 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 PAQR3Q6TCH7 311 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 TMEM207Q6UWW9 146 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 XKR5Q6UX68 686 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 RAPH1Q70E73 1250 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 CHST15Q7LFX5 561 aaPredicted RBP12.31□□□□□ -0.44
PDPN-210ENST00000513143 HID1Q8IV36 788 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ZBTB2Q8N680 514 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 CEP76Q8TAP6 659 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 HM13Q8TCT9 377 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ASZ1Q8WWH4 475 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ELMO1Q92556 727 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ARL8AQ96BM9 186 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 OR2M4Q96R27 311 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ERVMER34-1Q9H9K5 563 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 SYTL2Q9HCH5 934 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 SARS2Q9NP81 518 aaKnown RBP12.31□□□□□ -0.44
PDPN-210ENST00000513143 TM7SF3Q9NS93 570 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 TRNAU1APQ9NX07 287 aaKnown RBP12.31□□□□□ -0.44
PDPN-210ENST00000513143 SENP1Q9P0U3 644 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 TLK1Q9UKI8 766 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 RALGAPA1Q6GYQ0 2036 aa12.31□□□□□ -0.44
PDPN-210ENST00000513143 ARHGEF17Q96PE2 2063 aaPredicted RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 ADAMTS9Q9P2N4 1935 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 A0A087X1B8 175 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 A0A096LPK6 155 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 SLC5A10A0PJK1 596 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PRR19A6NJB7 356 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 EIF3FO00303 357 aaPredicted RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 DLL1O00548 723 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 SLCO2B1O94956 709 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 SYF2O95926 243 aaKnown RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 CSF2P04141 144 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 APOA4P06727 396 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 CBSLP0DN79 551 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 ACP5P13686 325 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 NME1P15531 152 aaKnown RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 ZNF37AP17032 561 aaPredicted RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 VCLP18206 1134 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 CBSP35520 551 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 SLC26A3P40879 764 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 CCNFP41002 786 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 CTSKP43235 329 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 CLCNKAP51800 687 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 BNC1Q01954 994 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PLOD1Q02809 727 aaPredicted RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 SLC18A2Q05940 514 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 RPA4Q13156 261 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 BOP1Q14137 746 aaKnown RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 LPAL2Q16609 132 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 INSCQ1MX18 579 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 KIF19Q2TAC6 998 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 TAF1BQ53T94 588 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms