RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 COL12A1Q99715 3063 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 A0A0U1RQS6 177 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ZNF487B1APH4 448 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ANKRD66B4E2M5 251 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 SNX2O60749 519 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 DNAJC6O75061 913 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 PRLP01236 227 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 JCHAINP01591 159 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ATP1A1P05023 1023 aaKnown RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 HLA-DQB2P05538 268 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 LIFP15018 202 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ZFXP17010 805 aaPredicted RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 ITGB6P18564 788 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 WT1P19544 449 aaPredicted RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 CSF2RBP32927 897 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 PBX1P40424 430 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 CD86P42081 329 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 MAPK9P45984 424 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 CCR10P46092 362 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 CLCNKAP51800 687 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 CYP4F2P78329 520 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 MC2RQ01718 297 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 MC1RQ01726 317 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 NIPAL4Q0D2K0 466 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 NFATC2Q13469 925 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ODF2Q5BJF6 829 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ZNF569Q5MCW4 686 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 HENMT1Q5T8I9 393 aaKnown RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 PDPK2PQ6A1A2 396 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ARHGAP22Q7Z5H3 698 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 TRIM48Q8IWZ4 208 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 NLGN4XQ8N0W4 816 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 NLGN4YQ8NFZ3 816 aaPredicted RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 ARRDC2Q8TBH0 407 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 CPLX3Q8WVH0 158 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 HTR3CQ8WXA8 447 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 NCSTNQ92542 709 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 FAF2Q96CS3 445 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 HDAC11Q96DB2 347 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 SLC45A3Q96JT2 553 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 SMIM14Q96QK8 99 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 FUCA2Q9BTY2 467 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 ZSCAN5AQ9BUG6 496 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 SLC12A9Q9BXP2 914 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 MAK16Q9BXY0 300 aaKnown RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 BRD8Q9H0E9 1235 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 GPN2Q9H9Y4 310 aaPredicted RBP7.09□□□□□ -1.27
USP46-208ENST00000512656 FBXO8Q9NRD0 319 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 OCIAD1Q9NX40 245 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 TBC1D29Q9UFV1 150 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 KCNK6Q9Y257 313 aa7.09□□□□□ -1.27
USP46-208ENST00000512656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP46-208ENST00000512656 USP9YO00507 2555 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 LILRA5A6NI73 299 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 A8MU76 341 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 KCNK1O00180 336 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 POLR1CO15160 346 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 KMOO15229 486 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 ARHGAP6O43182 974 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 GRID2O43424 1007 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 SUV39H1O43463 412 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 NUAK1O60285 661 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 MTA2O94776 668 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 SLC25A14O95258 325 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 ACP5P13686 325 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 F3P13726 295 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 VCLP18206 1134 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 TNNT3P45378 269 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 DCDC1P59894 354 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 IFI35P80217 286 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 GBE1Q04446 702 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 PPIDQ08752 370 aaKnown RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 ABHD18Q0P651 414 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 KCNAB2Q13303 367 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 PDK1Q15118 436 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 SLC14A2Q15849 920 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 ATP13A4Q4VNC1 1196 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 ANKS6Q68DC2 871 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 BZW1Q7L1Q6 419 aaKnown RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 KDELC2Q7Z4H8 507 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 LUZP1Q86V48 1076 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 VSIG1Q86XK7 387 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 ZNF761Q86XN6 746 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 TRAM1L1Q8N609 369 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 ESX1Q8N693 406 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 PQLC3Q8N755 202 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 BMPERQ8N8U9 685 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 SPATA16Q9BXB7 569 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 GPR63Q9BZJ6 419 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 XPO4Q9C0E2 1151 aaKnown RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 SLC25A51Q9H1U9 297 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 OSGEPL1Q9H4B0 414 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 DEF6Q9H4E7 631 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 UCK1Q9HA47 277 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 CBX8Q9HC52 389 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 TRIM39Q9HCM9 518 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms