RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MYL2P10916 166 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 C6P13671 934 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ENGP17813 658 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 DRD4P21917 467 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ATP5F1P24539 256 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ALDH3A1P30838 453 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 FMO4P31512 558 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PSMD8P48556 350 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 CLCN7P51798 805 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 SEC13P55735 322 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 RPS14P62263 151 aaKnown RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 TIAL1Q01085 375 aaKnown RBP eCLIP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PLOD1Q02809 727 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 GALNT1Q10472 559 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 CNTN1Q12860 1018 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 GBX1Q14549 363 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PCLAFQ15004 111 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 TEAD4Q15561 434 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ATP13A5Q4VNC0 1218 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 CDKL4Q5MAI5 379 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 CTSL3PQ5NE16 218 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PLEKHS1Q5SXH7 462 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PEAR1Q5VY43 1037 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 LIPMQ5VYY2 423 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PTRHD1Q6GMV3 140 aaKnown RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 TTC23LQ6PF05 361 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ADAMTSL4Q6UY14 1074 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 Q6ZVL8 140 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 NEK10Q6ZWH5 1172 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ADAMTSL2Q86TH1 951 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 SFTPA1Q8IWL2 248 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 FSTL5Q8N475 847 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 TMEM151AQ8N4L1 468 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ANKS4BQ8N8V4 417 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 CCDC63Q8NA47 563 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 GDAP1Q8TB36 358 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 STAG3L4Q8TBR4 150 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 CD200R1Q8TD46 325 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 KCTD4Q8WVF5 259 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 HMGB4Q8WW32 186 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 INPP5DQ92835 1189 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 GLYATL1Q969I3 302 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 KIAA1191Q96A73 305 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 AP2M1Q96CW1 435 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 NUS1Q96E22 293 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 DCUN1D1Q96GG9 259 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 NDNQ99608 321 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 SCNM1Q9BWG6 230 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 SPATA16Q9BXB7 569 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 ABCG8Q9H221 673 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 MTG2Q9H4K7 406 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 STN1Q9H668 368 aaKnown RBP8.98□□□□□ -0.97
NR1I3-228ENST00000511676 THAP1Q9NVV9 213 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 OXSMQ9NWU1 459 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 TMEM216Q9P0N5 145 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 HAO1Q9UJM8 370 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 PCDHGA4Q9Y5G9 962 aa8.98□□□□□ -0.97
NR1I3-228ENST00000511676 A0A1B0GTW7 788 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 TCP11X1B4DZS4 312 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 G3V2L1 256 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 CDX4O14627 284 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 TOR1BO14657 336 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 MID1O15344 667 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 SNX3O60493 162 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 TRIM13O60858 407 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 KERAO60938 352 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ADAM23O75077 832 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 RECQL5O94762 991 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 TSPAN12O95859 305 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 TROVE2P10155 538 aaKnown RBP eCLIP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 NEFHP12036 1026 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ATP1B2P14415 290 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 CD1DP15813 335 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 GM2AP17900 193 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 DGKAP23743 735 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 NUDT1P36639 197 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ETV3P41162 512 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ABCG1P45844 678 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 CDKN1CP49918 316 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 RPS21P63220 83 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 SIM1P81133 766 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 IRF9Q00978 393 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 OCRLQ01968 901 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 CSHL1Q14406 222 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ACOX1Q15067 660 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 PTPRRQ15256 657 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 SMAD1Q15797 465 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 CCDC6Q16204 474 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 BCL7AQ4VC05 210 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 SETMARQ53H47 684 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 GPRC6AQ5T6X5 926 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 MICALCLQ6ZW33 695 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 PIGWQ7Z7B1 504 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 LDB1Q86U70 411 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 LRRC34Q8IZ02 419 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 PLD6Q8N2A8 252 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 CHCHD4Q8N4Q1 142 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 AADATQ8N5Z0 425 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 DENND6BQ8NEG7 585 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms