RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 LRRC19Q9H756 370 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 NLRC4Q9NPP4 1024 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 SPATS2LQ9NUQ6 558 aaKnown RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 GPATCH2LQ9NWQ4 482 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 LRIT1Q9P2V4 623 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 MYOTQ9UBF9 498 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 ASH2LQ9UBL3 628 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 TRHDEQ9UKU6 1024 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 FZD10Q9ULW2 581 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 A0A1W2PQJ5 194 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 PRSS38A1L453 326 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 A8MX80 341 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 CACNB4O00305 520 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 HGSO14964 777 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 NUDT21O43809 227 aaKnown RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 ELFN1P0C7U0 828 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 SPTBP11277 2137 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 CPEP16870 476 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 AK4P27144 223 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 CSF2RBP32927 897 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 SUOXP51687 545 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 GSCP56915 257 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 YBEYP58557 167 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 POLR2FP61218 127 aaKnown RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 OGDHQ02218 1023 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 ARHGEF7Q14155 803 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 BECN1Q14457 450 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 CA9Q16790 459 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 CFAP58Q5T655 872 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 BRAT1Q6PJG6 821 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 RPTNQ6XPR3 784 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 LIPIQ6XZB0 460 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 DPPA4Q7L190 304 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 MON1BQ7L1V2 547 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 C17orf82Q86X59 251 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 LILRA2Q8N149 483 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 C3orf20Q8ND61 904 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 HCAR2Q8TDS4 363 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 ECHDC3Q96DC8 303 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 CMKLR1Q99788 373 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 SEMA3CQ99985 751 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 SELENOOQ9BVL4 669 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 WDR26Q9H7D7 661 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 FAM207AQ9NSI2 230 aaPredicted RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 ADAM22Q9P0K1 906 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 MOSPD1Q9UJG1 213 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 OAS3Q9Y6K5 1087 aaKnown RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 CACNA1DQ01668 2161 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 TNRC6AQ8NDV7 1962 aaKnown RBP6.62□□□□□ -1.35
COPS4-209ENST00000511653 ESPL1Q14674 2120 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 SHANK1Q9Y566 2161 aa6.62□□□□□ -1.35
COPS4-209ENST00000511653 IGHV5-10-1A0A0J9YXX1 117 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TRAFD1O14545 582 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 PPFIA2O75334 1257 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CPNE6O95741 557 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 FGF3P11487 239 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 SERPINA4P29622 427 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TRIM23P36406 574 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 NSFP46459 744 aaKnown RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 PAPOLAP51003 745 aaKnown RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 GP2P55259 537 aaKnown RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 TPI1P60174 286 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 UBE2HP62256 183 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 NR1D2Q14995 579 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 PTPRRQ15256 657 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CNGA3Q16281 694 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TCP11X2Q5H9J9 407 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 NKAIN2Q5VXU1 208 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 AFMIDQ63HM1 303 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 MILR1Q7Z6M3 343 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SRLQ86TD4 932 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 PHF13Q86YI8 300 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 ARHGAP12Q8IWW6 846 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 NPWQ8N729 165 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ZNF641Q96N77 438 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 PEBP4Q96S96 227 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SLC39A8Q9C0K1 460 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 VPS16Q9H269 839 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CLSTN2Q9H4D0 955 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ATP13A3Q9H7F0 1226 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CATSPERBQ9H7T0 1116 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ZMAT4Q9H898 229 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 GEMIN8Q9NWZ8 242 aaKnown RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 TMEM9Q9P0T7 183 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SEPT10Q9P0V9 454 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SIK3Q9Y2K2 1263 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 PLEKHM1Q9Y4G2 1056 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 POLQO75417 2590 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TACC2O95359 2948 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SEC16AO15027 2179 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 A0A0U1RQS6 177 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SIGLEC16A6NMB1 481 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 STMND1H3BQB6 276 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TEX33O43247 280 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 FGF1P05230 155 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CALB1P05937 261 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms