RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 VIPP01282 170 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 POLBP06746 335 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SLC35G4P0C7Q5 338 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 OR56A5P0C7T3 313 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ARNTP27540 789 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 CD1CP29017 333 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SLC19A1P41440 591 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 RPL21P46778 160 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ARCN1P48444 511 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ITGA8P53708 1063 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 OR1D5P58170 312 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 UBE2IP63279 158 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 GPLD1P80108 840 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 DHX9Q08211 1270 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 C2orf54Q08AI8 447 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SQSTM1Q13501 440 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 CAMK2BQ13554 666 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SEMA3AQ14563 771 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 RPE65Q16518 533 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 CLPPQ16740 277 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 LONRF1Q17RB8 773 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ISXQ2M1V0 245 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 AMZ1Q400G9 498 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 KIAA0930Q6ICG6 404 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 NEPROQ6NW34 567 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 FAM83HQ6ZRV2 1179 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 USP53Q70EK8 1073 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 LDB1Q86U70 411 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 PIM3Q86V86 326 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 PDIK1LQ8N165 341 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 OTUD6BQ8N6M0 293 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 GPR150Q8NGU9 434 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 OR10G6Q8NH81 332 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 HM13Q8TCT9 377 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF669Q96BR6 464 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 AHCYL2Q96HN2 611 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 FCRL3Q96P31 734 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 TCF12Q99081 682 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 EBNA1BP2Q99848 306 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 DPYSL5Q9BPU6 564 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ERP44Q9BS26 406 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 NAT9Q9BTE0 207 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 TSSK1BQ9BXA7 367 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 WWP1Q9H0M0 922 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 UCK1Q9HA47 277 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SLC40A1Q9NP59 571 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 POT1Q9NUX5 634 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 KCNK4Q9NYG8 393 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SCHIP1Q9P0W5 487 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 MARCH4Q9P2E8 410 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF624Q9P2J8 865 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 FAM8A1Q9UBU6 413 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 PSMD13Q9UNM6 376 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 WDR37Q9Y2I8 494 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SNX24Q9Y343 169 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 UTP11Q9Y3A2 253 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 PRSS21Q9Y6M0 314 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 RPS6KL1Q9Y6S9 549 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 GOLGA4Q13439 2230 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SPEGQ15772 3267 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF106Q9H2Y7 1883 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 IGHV1OR21-1A0A087WYE8 117 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ZCWPW2A0A1B0GU75 182 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 TRABD2BA6NFA1 517 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 LILRA5A6NI73 299 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 D6RAR5 112 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 GOLGA8KD6RF30 607 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 GOLGA8TH3BQL2 631 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 IFRD1O00458 451 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 PRMT5O14744 637 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 LIN7AO14910 233 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 CASC3O15234 703 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 RAD51CO43502 376 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 CPNE6O95741 557 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 TTC4O95801 387 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 MTHFD1P11586 935 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 PGAM1P18669 254 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 OGNP20774 298 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 PPM1FP49593 454 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 EPHA4P54764 986 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 INHBCP55103 352 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ARL4CP56559 192 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 MRPS25P82663 173 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 PLOD1Q02809 727 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 CALCOCO2Q13137 446 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 RPA4Q13156 261 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 THOC5Q13769 683 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 KRT33BQ14525 404 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 NAA30Q147X3 362 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 HIF1AQ16665 826 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 TYSND1Q2T9J0 566 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 BBS9Q3SYG4 887 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 MAP9Q49MG5 647 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF658BQ4V348 819 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 MSS51Q4VC12 460 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 RNF187Q5TA31 235 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 DUPD1Q68J44 220 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 PTRHD1Q6GMV3 140 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms