RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 KEAP1Q14145 624 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 MELKQ14680 651 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 ASPRV1Q53RT3 343 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 ERMARDQ5T6L9 678 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 C6orf163Q5TEZ5 329 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TUBA1AQ71U36 451 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 SLC9B2Q86UD5 537 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM173Q86WV6 379 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 CEP57Q86XR8 500 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 MUC20Q8N307 709 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 RBM15BQ8NDT2 890 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 RDM1Q8NG50 284 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 LMO3Q8TAP4 145 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 SPATA20Q8TB22 786 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TEKT4Q8WW24 435 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 LINGO1Q96FE5 620 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TTC14Q96N46 770 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF582Q96NG8 517 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TUBA1CQ9BQE3 449 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 POLR3CQ9BUI4 534 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 FNDC11Q9BVV2 318 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TRPC7Q9HCX4 862 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 MIOSQ9NXC5 875 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 CFDP1Q9UEE9 299 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 YIPF1Q9Y548 306 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZCWPW2A0A1B0GU75 182 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 OR2M5A3KFT3 312 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TSPY2A6NKD2 308 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GGPS1O95749 300 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TSPY3P0CV98 308 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TSPY8P0CW00 308 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 MYBL1P10243 752 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 FMO5P49326 533 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 FUT6P51993 359 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TSPY1Q01534 308 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GAGE2BQ13066 116 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 SNTB1Q13884 538 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 IL11RAQ14626 422 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GAGE2EQ4V326 116 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GCNT6Q5T4J0 391 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 STXBP5Q5T5C0 1151 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 NDUFAF5Q5TEU4 345 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 CAPRIN2Q6IMN6 1127 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GAGE2AQ6NT46 116 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 RPUSD3Q6P087 351 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TEX38Q6PEX7 206 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 SPSB3Q6PJ21 355 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 FIGLAQ6QHK4 219 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF517Q6ZMY9 492 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 KCTD8Q6ZWB6 473 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 CAMKMTQ7Z624 323 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 POC1AQ8NBT0 407 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TSPAN14Q8NG11 270 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 SORCS1Q8WY21 1168 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 NXNL1Q96CM4 212 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 MTERF3Q96E29 417 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 RADILQ96JH8 1075 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 OR6C1Q96RD1 312 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 MOV10L1Q9BXT6 1211 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 RABEP2Q9H5N1 569 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 OPA3Q9H6K4 179 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 TBC1D17Q9HA65 648 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 HHATLQ9HCP6 504 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 CCDC177Q9NQR7 707 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 HAO2Q9NYQ3 351 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GDE1Q9NZC3 331 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 GAGE2DQ9UEU5 116 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF711Q9Y462 761 aa3.28□□□□□ -1.88
TRAPPC11-207ENST00000511409 A0A0B4J293 547 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 PRSS51A0A1B0GVH4 220 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TRBC2A0A5B9 178 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 ASPDHA6ND91 283 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 PRAC2D3DTV9 90 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TULP2O00295 520 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 DVL1O14640 695 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 MEIS2O14770 477 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TO15178 435 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 GPR137BO60478 399 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TSPAN1O60635 241 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 DKC1O60832 514 aaKnown RBP eCLIP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TADA2AO75478 443 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 CREG1O75629 220 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TRUB2O95900 331 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 TFAP2AP05549 437 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 LIPFP07098 398 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 SNRNP70P08621 437 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 PFKFB1P16118 471 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 CPT2P23786 658 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 EEF1DP29692 281 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 AHRP35869 848 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 ARCN1P48444 511 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 CCR3P51677 355 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF132P52740 706 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 PPP5CP53041 499 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 DVL1P1P54792 670 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 RUNX1T1Q06455 604 aa3.27□□□□□ -1.89
TRAPPC11-207ENST00000511409 ALCAMQ13740 583 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms