RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SARNPP82979 210 aaKnown RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 C16orf72Q14CZ0 275 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 CASC4Q6P4E1 433 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 TMEM26Q6ZUK4 368 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 RAB11FIP2Q7L804 512 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 FBXO39Q8N4B4 442 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 AVL9Q8NBF6 648 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 WDR36Q8NI36 951 aaKnown RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 HM13Q8TCT9 377 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 NCSTNQ92542 709 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 GRAMD1AQ96CP6 724 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 MFSD3Q96ES6 412 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 LIN37Q96GY3 246 aaPredicted RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 PRR11Q96HE9 360 aaPredicted RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 RMDN2Q96LZ7 410 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 CCM2Q9BSQ5 444 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 TREX1Q9NSU2 369 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 IMP3Q9NV31 184 aaKnown RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 DKK4Q9UBT3 224 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 FREM2Q5SZK8 3169 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 A8MU76 341 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 GOLGA8TH3BQL2 631 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 SLC35G4P0C7Q5 338 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
DDX41-212ENST00000511040 RBMS1P29558 406 aaKnown RBP13.68□□□□□ -0.22
DDX41-212ENST00000511040 PREPP48147 710 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 GPLD1P80108 840 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 GPR18Q14330 331 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 ITIH4Q14624 930 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 TBC1D25Q3MII6 688 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 NAPRTQ6XQN6 538 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 C12orf66Q96MD2 445 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 INSM2Q96T92 566 aaPredicted RBP13.68□□□□□ -0.22
DDX41-212ENST00000511040 KIFC1Q9BW19 673 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.68□□□□□ -0.22
DDX41-212ENST00000511040 COG4Q9H9E3 785 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 CATSPERZQ9NTU4 200 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 PISDQ9UG56 409 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 KLHL3Q9UH77 587 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 SOX13Q9UN79 622 aa13.68□□□□□ -0.22
DDX41-212ENST00000511040 LILRA5A6NI73 299 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PLD2O14939 933 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 CD3EAPO15446 510 aaKnown RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 AP2A2O94973 939 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 VAPBO95292 243 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 AMD1P17707 334 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 ITIH1P19827 911 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 ARNTP27540 789 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 CASQ1P31415 396 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 ETV5P41161 510 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 NSG1P42857 185 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 LIMK2P53671 638 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 EPHA4P54764 986 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 SQSTM1Q13501 440 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PTK6Q13882 451 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 BRD3Q15059 726 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 CLPPQ16740 277 aaPredicted RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 ZNF658BQ4V348 819 aaPredicted RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 RNASEH2BQ5TBB1 312 aaKnown RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 TMEM71Q6P5X7 295 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PACS1Q6VY07 963 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PPIL6Q8IXY8 311 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 AGGF1Q8N302 714 aaeCLIP13.67□□□□□ -0.22
DDX41-212ENST00000511040 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 MCUQ8NE86 351 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PEX13Q92968 403 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 NAF1Q96HR8 494 aaKnown RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 SLC46A1Q96NT5 459 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 TTC1Q99614 292 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 TRIM51Q9BSJ1 452 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 VPS37BQ9H9H4 285 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 UCK1Q9HA47 277 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 XAB2Q9HCS7 855 aaKnown RBP13.67□□□□□ -0.22
DDX41-212ENST00000511040 ASCL3Q9NQ33 180 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 IL1RAPL1Q9NZN1 696 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 SAMD15Q9P1V8 674 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PCYOX1Q9UHG3 505 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 ACSL5Q9ULC5 683 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 PCDHGA8Q9Y5G5 932 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 APC2O95996 2303 aa13.67□□□□□ -0.22
DDX41-212ENST00000511040 ASPMQ8IZT6 3477 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 CACNA1GO43497 2377 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 SDR42E2A6NKP2 422 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms