RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 FAM169AQ9Y6X4 670 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 ZCWPW2A0A1B0GU75 182 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 PRMT5O14744 637 aaPredicted RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 HGSO14964 777 aaPredicted RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 KPNA5O15131 536 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 TOX3O15405 576 aaPredicted RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 CD3EAPO15446 510 aaKnown RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 SEC31AO94979 1220 aaKnown RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 NMBRP28336 390 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 CD1CP29017 333 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 PDX1P52945 283 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 CKAP4Q07065 602 aaKnown RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 ILF2Q12905 390 aaKnown RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 WHAMMP3Q1A5X7 153 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 ANKRD20A4Q4UJ75 823 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 DNAJC21Q5F1R6 531 aaKnown RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 ZNF449Q6P9G9 518 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 UNQ6494/PRO21346Q6UXR6 183 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 TMEM26Q6ZUK4 368 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 GALNT7Q86SF2 657 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 SDCCAG8Q86SQ7 713 aaPredicted RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 PIM3Q86V86 326 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 OR10G6Q8NH81 332 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 CALML6Q8TD86 181 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 PATE1Q8WXA2 126 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 SNF8Q96H20 258 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 P2RY12Q9H244 342 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 INTS10Q9NVR2 710 aaKnown RBP16.92■□□□□ 0.3
CLDND1-221ENST00000510541 WHRNQ9P202 907 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 KLHL42Q9P2K6 505 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 ENTPD2Q9Y5L3 495 aa16.92■□□□□ 0.3
CLDND1-221ENST00000510541 E7ESA3 106 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 H3BMM5 538 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 CCL22O00626 93 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 CSO75390 466 aaKnown RBP16.91■□□□□ 0.3
CLDND1-221ENST00000510541 RPLP0P05388 317 aaKnown RBP16.91■□□□□ 0.3
CLDND1-221ENST00000510541 POLBP06746 335 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 CRADDP78560 199 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 CLCA4Q14CN2 919 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 TMEM71Q6P5X7 295 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 SFTPA2Q8IWL1 248 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 PDIK1LQ8N165 341 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 CARFQ8N187 725 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 GABPB2Q8TAK5 448 aaPredicted RBP16.91■□□□□ 0.3
CLDND1-221ENST00000510541 SLC38A3Q99624 504 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 ERP44Q9BS26 406 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 STRADBQ9C0K7 418 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 OR52A5Q9H2C5 316 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 OSGEPL1Q9H4B0 414 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 COG4Q9H9E3 785 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 POLR1BQ9H9Y6 1135 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 SCHIP1Q9P0W5 487 aaPredicted RBP16.91■□□□□ 0.3
CLDND1-221ENST00000510541 SEMA5BQ9P283 1151 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 PCDHB1Q9Y5F3 818 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 FREM2Q5SZK8 3169 aa16.91■□□□□ 0.3
CLDND1-221ENST00000510541 CCDC187A0A096LP49 1063 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 SLC5A10A0PJK1 596 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 TRABD2BA6NFA1 517 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 PDZK1P1A8MUH7 402 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 TTI1O43156 1089 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 DUX1O43812 170 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 AVILO75366 819 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 VAPBO95292 243 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 VIPP01282 170 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 ESR1P03372 595 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 ANKRD34CP0C6C1 535 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 PGAM1P18669 254 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 LIMK2P53671 638 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 ERVPABLB-1P60509 514 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 BIRC2Q13490 618 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 NFE2L1Q14494 772 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 RPE65Q16518 533 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 IZUMO3Q5VZ72 239 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 FAM83HQ6ZRV2 1179 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-221ENST00000510541 CILP2Q8IUL8 1156 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-221ENST00000510541 WDR36Q8NI36 951 aaKnown RBP16.9■□□□□ 0.3
CLDND1-221ENST00000510541 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-221ENST00000510541 STAMBPL1Q96FJ0 436 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 PANX3Q96QZ0 392 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 EBNA1BP2Q99848 306 aaKnown RBP16.9■□□□□ 0.3
CLDND1-221ENST00000510541 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 TWSG1Q9GZX9 223 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 FAM96AQ9H5X1 160 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 KCNK4Q9NYG8 393 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 ACSL6Q9UKU0 697 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 DNAJC16Q9Y2G8 782 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 WDR37Q9Y2I8 494 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 COMMD10Q9Y6G5 202 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 COLEC10Q9Y6Z7 277 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 FRYQ5TBA9 3013 aa16.9■□□□□ 0.3
CLDND1-221ENST00000510541 MN1Q10571 1320 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-221ENST00000510541 OR51F1A6NGY5 319 aa16.89■□□□□ 0.29
CLDND1-221ENST00000510541 EIF3HO15372 352 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLDND1-221ENST00000510541 SNX2O60749 519 aa16.89■□□□□ 0.29
CLDND1-221ENST00000510541 GPC4O75487 556 aa16.89■□□□□ 0.29
CLDND1-221ENST00000510541 SLCO2B1O94956 709 aa16.89■□□□□ 0.29
CLDND1-221ENST00000510541 C9P02748 559 aa16.89■□□□□ 0.29
CLDND1-221ENST00000510541 MTHFD1P11586 935 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms