RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TMEM114B3SHH9 223 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PTGES3LE9PB15 166 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TRIM77I1YAP6 450 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 DNM1LO00429 736 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 LAD1O00515 517 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 AIM2O14862 343 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SMAD9O15198 467 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 DENRO43583 198 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PRDM1O75626 825 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SERPINB7O75635 380 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 GPX5O75715 221 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SORBS2O94875 1100 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PDE8BO95263 885 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 VNN2O95498 520 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 RAB3DO95716 219 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 POMCP01189 267 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 APOA1P02647 267 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TFRCP02786 760 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CLEC3BP05452 202 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 UQCRFS1P1P0C7P4 283 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MLNP12872 115 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MYF5P13349 255 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CPA3P15088 417 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CYP2A7P20853 494 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 HNRNPA2B1P22626 353 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CALB2P22676 271 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ABCD3P28288 659 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PTPN6P29350 595 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TYK2P29597 1187 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CDC25AP30304 524 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CHRNA3P32297 505 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PSMB10P40306 273 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SLC1A4P43007 532 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 KIR3DL2P43630 455 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CCR10P46092 362 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 LSSP48449 732 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ACTR3P61158 418 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 HERVK_113P62684 666 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MRPS25P82663 173 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 RHAGQ02094 409 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 KIF23Q02241 960 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 GLO1Q04760 184 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SCN1BQ07699 218 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SPIRE1Q08AE8 756 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 DRP2Q13474 957 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TMEM132BQ14DG7 1078 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TESK1Q15569 626 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ADRM1Q16186 407 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 DECR1Q16698 335 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TBRG1Q3YBR2 411 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ANO6Q4KMQ2 910 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF628Q5EBL2 1059 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 XKR4Q5GH76 650 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PAGE2BQ5JRK9 111 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MARCH8Q5T0T0 291 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 FAM69AQ5T7M9 428 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ARHGEF16Q5VV41 709 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 DUPD1Q68J44 220 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 RINT1Q6NUQ1 792 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 VHLLQ6RSH7 139 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 AFTPHQ6ULP2 937 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 KCNT2Q6UVM3 1135 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF517Q6ZMY9 492 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 RBM43Q6ZSC3 357 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 TOM1L2Q6ZVM7 507 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CYP4V2Q6ZWL3 525 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MIGA2Q7L4E1 593 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 BHLHA15Q7RTS1 189 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PLPPR4Q7Z2D5 763 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MIER3Q7Z3K6 550 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 DCXRQ7Z4W1 244 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CPLX4Q7Z7G2 160 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 NUDT13Q86X67 352 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PLA2G4DQ86XP0 818 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CMIPQ8IY22 773 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 NXPE1Q8N323 547 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MIER2Q8N344 545 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CEP112Q8N8E3 955 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 FNDC5Q8NAU1 212 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CHST14Q8NCH0 376 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 OR5T1Q8NG75 326 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 OR6B3Q8NGW1 331 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 EXOC6Q8TAG9 804 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 BBS10Q8TAM1 723 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 NELFBQ8WX92 580 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MUL1Q969V5 352 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 C1GALT1C1Q96EU7 318 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SCLYQ96I15 445 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 AARSD1Q9BTE6 412 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 EFHD1Q9BUP0 239 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 COLEC11Q9BWP8 271 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 WDR11Q9BZH6 1224 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 KCNN2Q9H2S1 579 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 RNPEPQ9H4A4 650 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PHAXQ9H814 394 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 EVA1AQ9H8M9 152 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 SLC35C2Q9NQQ7 365 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 KCNH7Q9NS40 1196 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 FBXO34Q9NWN3 711 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms