RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ADAMTSL2Q86TH1 951 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 TRIM74Q86UV6 250 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 OR56A4Q8NGH8 313 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 METTL6Q8TCB7 284 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 ZNF483Q8TF39 744 aaPredicted RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 MTFMTQ96DP5 389 aaKnown RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 ZNF641Q96N77 438 aaPredicted RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 LYSMD1Q96S90 227 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 FAM126AQ9BYI3 521 aaPredicted RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 CEP44Q9C0F1 390 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 ZDHHC7Q9NXF8 308 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 ZDHHC3Q9NYG2 299 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 STOML1Q9UBI4 398 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 ANGPTL3Q9Y5C1 460 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 LMNAP02545 664 aaKnown RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 ANPEPP15144 967 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 TIMP2P16035 220 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 PBLDP30039 288 aaPredicted RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 MTTPP55157 894 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 ST8SIA6P61647 398 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 IL27RAQ6UWB1 636 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 FUNDC1Q8IVP5 155 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 OR4F6Q8NGB9 312 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 OSCP1Q8WVF1 389 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 PCDHAC1Q9H158 963 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 IPPKQ9H8X2 491 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 SPATS2LQ9NUQ6 558 aaKnown RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 TMEM202A6NGA9 273 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 C16orf96A6NNT2 1141 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 RAD51BO15315 384 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 TAPBPO15533 448 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 ESRRBO95718 433 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 WASP42768 502 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 YBX1P67809 324 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 MS4A2Q01362 244 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 GTF2H2Q13888 395 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 PTK2BQ14289 1009 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 ACOX1Q15067 660 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 CRY1Q16526 586 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 AAK1Q2M2I8 961 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 GTF2H2CQ6P1K8 395 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 LILRA3Q8N6C8 439 aaPredicted RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 TEX37Q96LM6 180 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 FAM83DQ9H4H8 585 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 ZNHIT2Q9UHR6 403 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 ATG2BQ96BY7 2078 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 HEPACAM2A8MVW5 462 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 E7ENX8 843 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 STX16O14662 325 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 POLR2LP62875 67 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 MRPS22P82650 360 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 CAPRIN1Q14444 709 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 GPR33Q49SQ1 333 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 PARS2Q7L3T8 475 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 BPIFB1Q8TDL5 484 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 VPS33AQ96AX1 596 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 NKX2-4Q9H2Z4 354 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 CACNA2D2Q9NY47 1150 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 NUDT4Q9NZJ9 180 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 PKD2L2Q9NZM6 624 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 STX18Q9P2W9 335 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 SLC8A2Q9UPR5 921 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 FADS2P1A8MWK0 482 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 MRASO14807 208 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 LINC01565O15544 149 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 SNUPNO95149 360 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 SNRPB2P08579 225 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 FGF4P08620 206 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 CISD3P0C7P0 127 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 RPS3P23396 243 aaKnown RBP eCLIP14.64□□□□□ -0.07
PHF3-209ENST00000509330 AP2B1P63010 937 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 TXNDC11Q6PKC3 985 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 PHYKPLQ8IUZ5 450 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 FNDC5Q8NAU1 212 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 LEMD2Q8NC56 503 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 DCUN1D1Q96GG9 259 aa14.64□□□□□ -0.07
PHF3-209ENST00000509330 FARSBQ9NSD9 589 aaKnown RBP14.64□□□□□ -0.07
PHF3-209ENST00000509330 UPK3BL1B0FP48 263 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 UPK3BL2E5RIL1 263 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 OR7A17O14581 309 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 SLC9A3R1O14745 358 aaPredicted RBP14.63□□□□□ -0.07
PHF3-209ENST00000509330 KLK8O60259 260 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 ADH1CP00326 375 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 LBPP18428 481 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 PSME3P61289 254 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 MACC1Q6ZN28 852 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 RNF111Q6ZNA4 994 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 RETREG3Q86VR2 466 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.63□□□□□ -0.07
PHF3-209ENST00000509330 CBARPQ8N350 705 aaPredicted RBP14.63□□□□□ -0.07
PHF3-209ENST00000509330 ASB2Q96Q27 587 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 TMEM79Q9BSE2 394 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 NDE1Q9NXR1 346 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 ARL15Q9NXU5 204 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 DNAJA2O60884 412 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 MLYCDO95822 493 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 CHEK2O96017 543 aa14.63□□□□□ -0.07
PHF3-209ENST00000509330 RB1P06400 928 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms