RNA–Protein interactions for RNA: ENST00000509290.1

SEL1L3-205, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-205ENST00000509290 BRAFP15056 766 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 PDGFRAP16234 1089 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 TNFRSF1BP20333 461 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 PAX3P23760 479 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 IL4RP24394 825 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 NTSR1P30989 418 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 CASQ1P31415 396 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 MAGEA11P43364 429 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 GLUD2P49448 558 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 DNA2P51530 1060 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 ARSEP51690 589 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 HDAC4P56524 1084 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 MRPS25P82663 173 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 MRPS5P82675 430 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SLC25A11Q02978 314 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 EIF4EBP2Q13542 120 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 ARHGEF7Q14155 803 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SIX1Q15475 284 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 CFAP221Q4G0U5 840 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 C3orf38Q5JPI3 329 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SPOUT1Q5T280 376 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 LIN9Q5TKA1 542 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 ZNF280DQ6N043 979 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 C11orf63Q6NUN7 778 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 DNAJC24Q6P3W2 148 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SLC26A9Q7LBE3 791 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 ADGRD2Q7Z7M1 963 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 FMNL3Q8IVF7 1028 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SCN4BQ8IWT1 228 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 DCP1BQ8IZD4 617 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 DEFB106AQ8N104 65 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 THEM5Q8N1Q8 247 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 PYROXD2Q8N2H3 581 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 C12orf76Q8N812 135 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 NIPA2Q8N8Q9 360 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 VN1R2Q8NFZ6 395 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 NMD3Q96D46 503 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 P2RY11Q96G91 374 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SMARCD1Q96GM5 515 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 C8orf48Q96LL4 319 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 CFAP57Q96MR6 1250 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 KLHL5Q96PQ7 755 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 TBCBQ99426 244 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 NAPGQ99747 312 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 LBHD1Q9BQE6 289 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 TSGA10Q9BZW7 698 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 ZNF334Q9HCZ1 680 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 WDR6Q9NNW5 1121 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 PARVAQ9NVD7 372 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 GPATCH2LQ9NWQ4 482 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 MTMR10Q9NXD2 777 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 CDC23Q9UJX2 597 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 ANAPC7Q9UJX3 599 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SNX12Q9UMY4 172 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 NAALADL1Q9UQQ1 740 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 R3HDM2Q9Y2K5 976 aaKnown RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 JRKLQ9Y4A0 524 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 SNX10Q9Y5X0 201 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 PDE4DIPQ5VU43 2346 aa4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 TNRC18O15417 2968 aaPredicted RBP4.3□□□□□ -1.72
SEL1L3-205ENST00000509290 TRIOBPQ9H2D6 2365 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 TDRD15B5MCY1 1934 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 NLRC5Q86WI3 1866 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 CTAGE9A4FU28 777 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 GOLGA6L9A6NEM1 432 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 A8MVJ9 347 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 B4DGG1 531 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 FAM72CH0Y354 149 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 RAB27BO00194 218 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 PER2O15055 1255 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 MDM4O15151 490 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 PRAMEF2O60811 474 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 DAB1O75553 588 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 RFPL1O75677 317 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 IPO7O95373 1038 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 EPCAMP16422 314 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 PSMA2P25787 234 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 CTNNA2P26232 953 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 ACVR2AP27037 513 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 MIPP30301 263 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 MAN1A1P33908 653 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 CTNNA1P35221 906 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 CTNNB1P35222 781 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 CCR2P41597 374 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 ACADSBP45954 432 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 RGS19P49795 217 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 NAP1L1P55209 391 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 RPS16P62249 146 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 YWHAZP63104 245 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 ZXDBP98169 803 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 TSPY1Q01534 308 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 ELAVL2Q12926 359 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 TAF10Q12962 218 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 CNN3Q15417 329 aaKnown RBP4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 TRADDQ15628 312 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 FAM72AQ5TYM5 149 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 PLPP4Q5VZY2 271 aa4.29□□□□□ -1.72
SEL1L3-205ENST00000509290 BSPRYQ5W0U4 402 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms