RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 NODALQ96S42 347 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 RUFY1Q96T51 708 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 TUBB2BQ9BVA1 445 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 UTP14AQ9BVJ6 771 aaKnown RBP2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 CADM1Q9BY67 442 aaKnown RBP2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 IFIH1Q9BYX4 1025 aaKnown RBP2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 CTDSP1Q9GZU7 261 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 HIPK3Q9H422 1215 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 GAREM1Q9H706 876 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 C20orf141Q9NUB4 165 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 OCIAD1Q9NX40 245 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 TAS2R3Q9NYW6 316 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 ERAP1Q9NZ08 941 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 COX16Q9P0S2 106 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 COPG2Q9UBF2 871 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 IL36RNQ9UBH0 155 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 ITM2BQ9Y287 266 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 DDX49Q9Y6V7 483 aaKnown RBP2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 GREB1LQ9C091 1923 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 ATAD2BQ9ULI0 1458 aa2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 TP53BP1Q12888 1972 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1B-204ENST00000509006 IGHV4-28A0A0C4DH34 117 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TCRBV7S3A2A0A539 114 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 OR6C68A6NDL8 312 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANTXRLA6NF34 631 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 URADA6NGE7 173 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCDC169A6NNP5 214 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 H0YIN7 160 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 O00370 1275 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 BUB3O43684 328 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KCNJ13O60928 360 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TACC1O75410 805 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 CRCPO75575 148 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PSMD10O75832 226 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TPPPO94811 219 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TRIM16O95361 564 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TUBBP07437 444 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 CYP21A2P08686 494 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 MYZAPP0CAP1 466 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ARSAP15289 507 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF182P17025 639 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KLRC2P26717 231 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PCGF2P35227 344 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 MTNR1AP48039 350 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KHKP50053 298 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF75DP51815 510 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 LUMP51884 338 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 GALCP54803 685 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMPRSS3P57727 454 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 STARD6P59095 220 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PSMC6P62333 389 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TUBB4BP68371 445 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ASIC1P78348 528 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KLHL30Q0D2K2 578 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 GRAPQ13588 217 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ITGA7Q13683 1181 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 IL13RA2Q14627 380 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KRT24Q2M2I5 525 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KBTBD12Q3ZCT8 623 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 LRRC23Q53EV4 343 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 IGSF11Q5DX21 431 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 MPP7Q5T2T1 576 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 SERTAD4-AS1Q5TG53 156 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 DHRS7BQ6IAN0 325 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 CACNA2D4Q7Z3S7 1137 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 SPATA19Q7Z5L4 167 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 CAMKMTQ7Z624 323 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 RABEPKQ7Z6M1 372 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 SMIM29Q86T20 159 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM160B2Q86V87 743 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMEM200AQ86VY9 491 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TBC1D21Q8IYX1 336 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 OTUD6BQ8N6M0 293 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 HORMAD2Q8N7B1 307 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 MRPL43Q8N983 215 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 C9orf43Q8TAL5 461 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TEKT4Q8WW24 435 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF606Q8WXB4 792 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PSPC1Q8WXF1 523 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ATL1Q8WXF7 558 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 MR1Q95460 341 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PERPQ96FX8 193 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PDLIM5Q96HC4 596 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM111AQ96PZ2 611 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 KCNK16Q96T55 309 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 IFT27Q9BW83 186 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TRIM6Q9C030 488 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 DPH5Q9H2P9 285 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TTYH1Q9H313 450 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 RWDD1Q9H446 243 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PLK3Q9H4B4 646 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 AKIRIN1Q9H9L7 192 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 Q9N2J8 555 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PPANQ9NQ55 473 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TCF7L2Q9NQB0 619 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMEM248Q9NWD8 314 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 ARL15Q9NXU5 204 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 AATFQ9NY61 560 aaKnown RBP eCLIP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 DONSONQ9NYP3 566 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 GDE1Q9NZC3 331 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms