RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FNBP1LQ5T0N5 605 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ATP1A1-AS1Q5TC04 95 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 CACHD1Q5VU97 1274 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ANKRD20A3Q5VUR7 823 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 METRNLQ641Q3 311 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 TMEM220Q6QAJ8 160 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 GALNT6Q8NCL4 622 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF398Q8TD17 642 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ALG3Q92685 438 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ZDHHC12Q96GR4 267 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF514Q96K75 400 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 FAM118BQ9BPY3 351 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 APOL2Q9BQE5 337 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 OSBPL8Q9BZF1 889 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 FKBPLQ9UIM3 349 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 KCTD3Q9Y597 815 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 MRPS18BQ9Y676 258 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 EPN1Q9Y6I3 576 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 DNMT3AQ9Y6K1 912 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 COL12A1Q99715 3063 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 AGAP14A8MT82 685 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 BTNL10A8MVZ5 291 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 KCNN4O15554 427 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 SGTAO43765 313 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 SRP72O76094 671 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 KIAA0754O94854 1291 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 RBP3P10745 1247 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 MTHFD1P11586 935 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 FGF5P12034 268 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 CCR10P46092 362 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF75DP51815 510 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF140P52738 457 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 EIF3EP60228 445 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 XIAPP98170 497 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 CCDC181Q5TID7 509 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 AADACL2Q6P093 401 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 C6orf15Q6UXA7 325 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 ATG14Q6ZNE5 492 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 CDKL3Q8IVW4 592 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 LRRC57Q8N9N7 239 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 CCDC110Q8TBZ0 833 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 ELMO2Q96JJ3 720 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 IMP3Q9NV31 184 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 AAR2Q9Y312 384 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 LRRK2Q5S007 2527 aa12.72□□□□□ -0.37
HMGCS1-205ENST00000508319 PIKFYVEQ9Y2I7 2098 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 CCDC66A2RUB6 948 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 GRID2IPA4D2P6 1211 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 C5orf60A6NFR6 353 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 C2orf81A6NN90 581 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 SPAG6O75602 509 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 TIAF1O95411 115 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 TCN2P20062 427 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 MSH3P20585 1137 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 DLSTP36957 453 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 CSRP3P50461 194 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 RWDD2BP57060 319 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 MC1RQ01726 317 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 KCNC4Q03721 635 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 KCNAB1Q14722 419 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 PLCL1Q15111 1095 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 BCL7AQ4VC05 210 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 DUS1LQ6P1R4 473 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 RAD9BQ6WBX8 426 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 PPP1R3BQ86XI6 285 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 TMTC1Q8IUR5 882 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 KLHDC8BQ8IXV7 354 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 ACRBPQ8NEB7 543 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 OR13C4Q8NGS5 318 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 OR2L2Q8NH16 312 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 UBXN4Q92575 508 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 STAMBPL1Q96FJ0 436 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 LINC00615Q96LM1 132 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 SPATA13Q96N96 652 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 INSM2Q96T92 566 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 MAP3K3Q99759 626 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 WWP1Q9H0M0 922 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 ASB8Q9H765 288 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 LNPEPQ9UIQ6 1025 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 CROTQ9UKG9 612 aa12.71□□□□□ -0.37
HMGCS1-205ENST00000508319 KLHL33A6NCF5 533 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 MGAT4DA6NG13 374 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 CCL22O00626 93 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 STK10O94804 968 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms