RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PIKFYVEQ9Y2I7 2098 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 GOLGA6L9A6NEM1 432 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 LDB2O43679 373 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 RASSF9O75901 435 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 STK17BO94768 372 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 CRTAMO95727 393 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 PLA2G2AP14555 144 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 TPH1P17752 444 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 FOXM1Q08050 763 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 IRGCQ6NXR0 463 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 FAM92BQ6ZTR7 304 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 UNC5BQ8IZJ1 945 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 ZSCAN1Q8NBB4 408 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 SLC35B2Q8TB61 432 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 ATG4AQ8WYN0 398 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 MED8Q96G25 268 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 DNAJC1Q96KC8 554 aaKnown RBP13.98□□□□□ -0.17
RAB28-205ENST00000508274 TEFMQ96QE5 360 aaKnown RBP13.98□□□□□ -0.17
RAB28-205ENST00000508274 SLC12A9Q9BXP2 914 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 WWP1Q9H0M0 922 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 ZNF768Q9H5H4 540 aaKnown RBP13.98□□□□□ -0.17
RAB28-205ENST00000508274 ARNT2Q9HBZ2 717 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 IMP3Q9NV31 184 aaKnown RBP13.98□□□□□ -0.17
RAB28-205ENST00000508274 CRLS1Q9UJA2 301 aa13.98□□□□□ -0.17
RAB28-205ENST00000508274 LOC101059948A0A1B0GTJ6 334 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 AGAP14A8MT82 685 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 POLR1CO15160 346 aaPredicted RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 KCNJ13O60928 360 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 FAM87AP0C7U9 286 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 PRSS56P0CW18 603 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 CDKN1CP49918 316 aaPredicted RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 TBR1Q16650 682 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 CACHD1Q5VU97 1274 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 METRNLQ641Q3 311 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 ZNF605Q86T29 641 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 RBM12BQ8IXT5 1001 aaKnown RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 NLGN4XQ8N0W4 816 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 NLGN4YQ8NFZ3 816 aaPredicted RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 OR2L2Q8NH16 312 aa13.97□□□□□ -0.17
RAB28-205ENST00000508274 INSM2Q96T92 566 aaPredicted RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 TMEM184BQ9Y519 407 aaPredicted RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 DNMT3AQ9Y6K1 912 aaPredicted RBP13.97□□□□□ -0.17
RAB28-205ENST00000508274 CCDC78A2IDD5 438 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 DLGAP3O95886 979 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 ITGB2P05107 769 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.17
RAB28-205ENST00000508274 ZNF28P17035 718 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 PLCL1Q15111 1095 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 PARP6Q2NL67 630 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 BCL7AQ4VC05 210 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 PRSS42Q7Z5A4 293 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 NXPE1Q8N323 547 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 ZNF514Q96K75 400 aaPredicted RBP13.96□□□□□ -0.17
RAB28-205ENST00000508274 C12orf66Q96MD2 445 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 OR6C1Q96RD1 312 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 ARHGAP9Q9BRR9 750 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 ZPBPQ9BS86 351 aa13.96□□□□□ -0.17
RAB28-205ENST00000508274 ITGALP20701 1170 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 MC4RP32245 332 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 PRLHRP49683 370 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 PDE1BQ01064 536 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 SEPT6Q14141 434 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 POU6F1Q14863 301 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 SNX20Q7Z614 316 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 TXLNBQ8N3L3 684 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 ELMO2Q96JJ3 720 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 RMDN2Q96LZ7 410 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 ULBP3Q9BZM4 244 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 GPN2Q9H9Y4 310 aaPredicted RBP13.96□□□□□ -0.18
RAB28-205ENST00000508274 EPHA6Q9UF33 1036 aa13.96□□□□□ -0.18
RAB28-205ENST00000508274 TLN1Q9Y490 2541 aaKnown RBP13.95□□□□□ -0.18
RAB28-205ENST00000508274 IGHV5-51A0A0C4DH38 117 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
RAB28-205ENST00000508274 POLBP06746 335 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 HADHAP40939 763 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 NFATC3Q12968 1075 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 P3H1Q32P28 736 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 KLHL6Q8WZ60 621 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 ULK4Q96C45 1275 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 DCUN1D1Q96GG9 259 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 ZDHHC12Q96GR4 267 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 LINC00615Q96LM1 132 aaPredicted RBP13.95□□□□□ -0.18
RAB28-205ENST00000508274 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 COPS8Q99627 209 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 RAB33BQ9H082 229 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 IL17BQ9UHF5 180 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
RAB28-205ENST00000508274 GUCA1BQ9UMX6 200 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 TENM4Q6N022 2769 aa13.95□□□□□ -0.18
RAB28-205ENST00000508274 B8ZZF3 427 aa13.94□□□□□ -0.18
RAB28-205ENST00000508274 PYCARD-AS1I3L0S3 204 aa13.94□□□□□ -0.18
RAB28-205ENST00000508274 NKX2-8O15522 239 aa13.94□□□□□ -0.18
RAB28-205ENST00000508274 ZNF189O75820 626 aaPredicted RBP13.94□□□□□ -0.18
RAB28-205ENST00000508274 ZIC2O95409 532 aaPredicted RBP13.94□□□□□ -0.18
RAB28-205ENST00000508274 AP2A1O95782 977 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms