RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SH3BP5O60239 455 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 ALPPL2P10696 532 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 PKMP14618 531 aaKnown RBP12.61□□□□□ -0.39
TCOF1-210ENST00000506767 VCLP18206 1134 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 MCM3P25205 808 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 PHBP35232 272 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 PMS2P54278 862 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 NFE2L1Q14494 772 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-210ENST00000506767 INAVAQ3KP66 663 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 PTRHD1Q6GMV3 140 aaKnown RBP12.61□□□□□ -0.39
TCOF1-210ENST00000506767 ZCCHC8Q6NZY4 707 aaKnown RBP12.61□□□□□ -0.39
TCOF1-210ENST00000506767 ABRAXAS1Q6UWZ7 409 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 DGLUCYQ7Z3D6 616 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 C17orf82Q86X59 251 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-210ENST00000506767 NAXDQ8IW45 347 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 FAM46DQ8NEK8 389 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 HM13Q8TCT9 377 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 CDKL2Q92772 493 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 PANX3Q96QZ0 392 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 TBC1D29Q9UFV1 150 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 DOLKQ9UPQ8 538 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 DNAJC16Q9Y2G8 782 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 MED16Q9Y2X0 877 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 COMMD10Q9Y6G5 202 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ARID1BQ8NFD5 2236 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 CABIN1Q9Y6J0 2220 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 SLC5A10A0PJK1 596 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 LIN7AO14910 233 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 RIPK2O43353 540 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 SIGLEC6O43699 453 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 NOBOXO60393 691 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 PIAS1O75925 651 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ACSL3O95573 720 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 EML2O95834 649 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 TUBBP07437 444 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ABHD2P08910 425 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 F3P13726 295 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 BRAFP15056 766 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 IDSP22304 550 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 AOAHP28039 575 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 CCR7P32248 378 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 CD151P48509 253 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 FOXK2Q01167 660 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 NAB1Q13506 487 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 RSPO4Q2I0M5 234 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 AGAP9Q5VTM2 703 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 STRA8Q7Z7C7 330 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ZC3HC1Q86WB0 502 aaKnown RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 SFTPA2Q8IWL1 248 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 CFAP206Q8IYR0 622 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 NAGSQ8N159 534 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 LILRA3Q8N6C8 439 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 GPR156Q8NFN8 814 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 RHBDD1Q8TEB9 315 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 AENQ8WTP8 325 aaKnown RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 SETD7Q8WTS6 366 aaKnown RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ZDHHC1Q8WTX9 485 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 AARSD1Q9BTE6 412 aaKnown RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 TSSK1BQ9BXA7 367 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 EPB41L4BQ9H329 900 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 DPEP2Q9H4A9 486 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ACSS3Q9H6R3 686 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 PRDM8Q9NQV8 689 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ACSL5Q9ULC5 683 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 CORO1CQ9ULV4 474 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-210ENST00000506767 U3KQA8 63 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 DCHS1Q96JQ0 3298 aa12.6□□□□□ -0.39
TCOF1-210ENST00000506767 ZNF292O60281 2723 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 NIPSNAP2O75323 286 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 GPC4O75487 556 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 TRIM16O95361 564 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CD9P21926 228 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CLCN7P51798 805 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CSE1LP55060 971 aaKnown RBP12.59□□□□□ -0.39
TCOF1-210ENST00000506767 TIAL1Q01085 375 aaKnown RBP eCLIP12.59□□□□□ -0.39
TCOF1-210ENST00000506767 PLOD1Q02809 727 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-210ENST00000506767 ILF2Q12905 390 aaKnown RBP12.59□□□□□ -0.39
TCOF1-210ENST00000506767 RPA4Q13156 261 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.399e-8■■■■□ 20.6
TCOF1-210ENST00000506767 IYDQ6PHW0 289 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 SFRP1Q8N474 314 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 ARL10Q8N8L6 244 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 ELMO1Q92556 727 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 KCNJ9Q92806 393 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CAMK1GQ96NX5 476 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CYTH2Q99418 400 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CPNE1Q99829 537 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 OSGEPL1Q9H4B0 414 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms