RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 FAM237BA0A1B0GVD1 139 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 OR52A4PA6NMU1 304 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 CD3EAPO15446 510 aaKnown RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 B4GAT1O43505 415 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 AVILO75366 819 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 BRAFP15056 766 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 NMBRP28336 390 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 MLLT3P42568 568 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 PTGIRP43119 386 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 MAGEA3P43357 314 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 GABREP78334 506 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 RPA4Q13156 261 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 TRA2AQ13595 282 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNCA-209ENST00000506244 KCTD19Q17RG1 926 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 DNAJC21Q5F1R6 531 aaKnown RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 RNF187Q5TA31 235 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 IZUMO3Q5VZ72 239 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 FAM83HQ6ZRV2 1179 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 TMEM26Q6ZUK4 368 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 CLDN19Q8N6F1 224 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 OR4D9Q8NGE8 314 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 MFSD3Q96ES6 412 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 CCDC97Q96F63 343 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 C16orf45Q96MC5 204 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 ZNF624Q9P2J8 865 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 ATXN7L1Q9ULK2 861 aaPredicted RBP16.35■□□□□ 0.21
SNCA-209ENST00000506244 HEBP2Q9Y5Z4 205 aa16.35■□□□□ 0.21
SNCA-209ENST00000506244 IFRD1O00458 451 aaPredicted RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 LIN7AO14910 233 aaPredicted RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 VAPBO95292 243 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 MTHFD1P11586 935 aaKnown RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 NDUFS1P28331 727 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 CD1CP29017 333 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 SLC19A1P41440 591 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 LSSP48449 732 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 PLOD1Q02809 727 aaPredicted RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 CKAP4Q07065 602 aaKnown RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 MORF4L2Q15014 288 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 SYTL3Q4VX76 610 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 C3orf38Q5JPI3 329 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 PHF19Q5T6S3 580 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 WDR74Q6RFH5 385 aaPredicted RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 IGF2-ASQ6U949 168 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 SDCCAG8Q86SQ7 713 aaPredicted RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 LRRC6Q86X45 466 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 ZNF761Q86XN6 746 aaPredicted RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 SLITRK4Q8IW52 837 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 CFAP206Q8IYR0 622 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 KRT12Q99456 494 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 NUDT22Q9BRQ3 303 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 FOXP3Q9BZS1 431 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 WWP1Q9H0M0 922 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 COG4Q9H9E3 785 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 RDH14Q9HBH5 336 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 SLC40A1Q9NP59 571 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 IMP3Q9NV31 184 aaKnown RBP16.34■□□□□ 0.21
SNCA-209ENST00000506244 PSMD13Q9UNM6 376 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 VPS9D1Q9Y2B5 631 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 WDR37Q9Y2I8 494 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 PCDHGA8Q9Y5G5 932 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 MAD1L1Q9Y6D9 718 aa16.34■□□□□ 0.21
SNCA-209ENST00000506244 UNC13CQ8NB66 2214 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 IGF2RP11717 2491 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 KIF2AO00139 706 aaPredicted RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 PRMT5O14744 637 aaPredicted RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 HGSO14964 777 aaPredicted RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 TTI1O43156 1089 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 NDUFS3O75489 264 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 DXOO77932 396 aaKnown RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 TUBB4AP04350 444 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 OGNP20774 298 aaKnown RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 MAPK9P45984 424 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 ZFP36L1Q07352 338 aaKnown RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 CLCA4Q14CN2 919 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 RPE65Q16518 533 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 ST3GAL2Q16842 350 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 TMEM71Q6P5X7 295 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 KLHL35Q6PF15 583 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 MAATS1Q7Z4T9 603 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 B3GNT8Q7Z7M8 397 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 SPATA4Q8NEY3 305 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 GABPB2Q8TAK5 448 aaPredicted RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 MDM1Q8TC05 714 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 NAT14Q8WUY8 206 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 ZFPM2Q8WW38 1151 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 ZNF669Q96BR6 464 aaPredicted RBP16.33■□□□□ 0.2
SNCA-209ENST00000506244 SNF8Q96H20 258 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 C12orf66Q96MD2 445 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 TCF12Q99081 682 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 NAT9Q9BTE0 207 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 GNPTGQ9UJJ9 305 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 SATB2Q9UPW6 733 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 RPS6KL1Q9Y6S9 549 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 COLEC10Q9Y6Z7 277 aa16.33■□□□□ 0.2
SNCA-209ENST00000506244 PLD2O14939 933 aa16.32■□□□□ 0.2
SNCA-209ENST00000506244 CASC3O15234 703 aaKnown RBP16.32■□□□□ 0.2
SNCA-209ENST00000506244 BRINP1O60477 761 aa16.32■□□□□ 0.2
SNCA-209ENST00000506244 USP1O94782 785 aa16.32■□□□□ 0.2
SNCA-209ENST00000506244 UBXN7O94888 489 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms