RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OGFRQ9NZT2 677 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
SMN1-204ENST00000506163 AK5Q9Y6K8 562 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 ZFHX4Q86UP3 3567 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 IGHV5-10-1A0A0J9YXX1 117 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 TMEM8BA6NDV4 472 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 GOLGA8KD6RF30 607 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 GOLGA8TH3BQL2 631 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 AP3B1O00203 1094 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 MLNP12872 115 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 ARCN1P48444 511 aaKnown RBP17.47■□□□□ 0.39
SMN1-204ENST00000506163 LSSP48449 732 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 GABREP78334 506 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 MRPS25P82663 173 aaKnown RBP17.47■□□□□ 0.39
SMN1-204ENST00000506163 C3orf38Q5JPI3 329 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 CAPRIN2Q6IMN6 1127 aaKnown RBP17.47■□□□□ 0.39
SMN1-204ENST00000506163 NAPRTQ6XQN6 538 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 PROSER1Q86XN7 944 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 GRAMD1AQ96CP6 724 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 NXPE2Q96DL1 559 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 LIN37Q96GY3 246 aaPredicted RBP17.47■□□□□ 0.39
SMN1-204ENST00000506163 SIGLEC10Q96LC7 697 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 RMDN2Q96LZ7 410 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 TRIM51Q9BSJ1 452 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 POLR1BQ9H9Y6 1135 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 UCK1Q9HA47 277 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 EPB41L5Q9HCM4 733 aa17.47■□□□□ 0.39
SMN1-204ENST00000506163 ANKRD11Q6UB99 2663 aaPredicted RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 C17orf113A0A1B0GUU1 675 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 DNALI1O14645 258 aaPredicted RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 TP73O15350 636 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 TLX3O43711 291 aaPredicted RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 VIPP01282 170 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 HGFP14210 728 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 PDHA2P29803 388 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 CASQ1P31415 396 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 NSG1P42857 185 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 GPLD1P80108 840 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 SARNPP82979 210 aaKnown RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 MAP9Q49MG5 647 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 DUS1LQ6P1R4 473 aaKnown RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 JAMLQ86YT9 394 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 PPIL6Q8IXY8 311 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 RCBTB1Q8NDN9 531 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 JPH3Q8WXH2 748 aaPredicted RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 SH3KBP1Q96B97 665 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 TMEM74Q96NL1 305 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 COG4Q9H9E3 785 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 XAB2Q9HCS7 855 aaKnown RBP17.46■□□□□ 0.39
SMN1-204ENST00000506163 ASCL3Q9NQ33 180 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 CATSPERZQ9NTU4 200 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 IL1RAPL1Q9NZN1 696 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 PDP2Q9P2J9 529 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 RNF14Q9UBS8 474 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 ASIC3Q9UHC3 531 aa17.46■□□□□ 0.39
SMN1-204ENST00000506163 LILRA5A6NI73 299 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 SDR42E2A6NKP2 422 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 CD3EAPO15446 510 aaKnown RBP17.45■□□□□ 0.38
SMN1-204ENST00000506163 TTI1O43156 1089 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 AP2A2O94973 939 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 VAPBO95292 243 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 PAFAH1B1P43034 410 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 LIMK2P53671 638 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 GPR18Q14330 331 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 C16orf72Q14CZ0 275 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 ANKRD20A4Q4UJ75 823 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 MSS51Q4VC12 460 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 FASTKD1Q53R41 847 aaKnown RBP17.45■□□□□ 0.38
SMN1-204ENST00000506163 CERS6Q6ZMG9 384 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 TRIM48Q8IWZ4 208 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 OR4D9Q8NGE8 314 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 HM13Q8TCT9 377 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 LKAAEAR1Q8TD35 194 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 SLC46A1Q96NT5 459 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 OR52A5Q9H2C5 316 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 POT1Q9NUX5 634 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 ACSL5Q9ULC5 683 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 RAXQ9Y2V3 346 aa17.45■□□□□ 0.38
SMN1-204ENST00000506163 KMT2BQ9UMN6 2715 aaPredicted RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 CCDC187A0A096LP49 1063 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 ZCWPW2A0A1B0GU75 182 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 FAM237BA0A1B0GVD1 139 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 KLHL33A6NCF5 533 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 SRRM3A6NNA2 597 aaPredicted RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 IQCF5A8MTL0 148 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 CCDC188H7C350 402 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 BANF1O75531 89 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 MTHFD1P11586 935 aaKnown RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 TYRP1P17643 537 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 MAPK9P45984 424 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 PREPP48147 710 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 EPHA4P54764 986 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 DR1Q01658 176 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 CLPPQ16740 277 aaPredicted RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 PHF19Q5T6S3 580 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 LYPLAL1Q5VWZ2 237 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 IZUMO3Q5VZ72 239 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 TMEM71Q6P5X7 295 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 RAB11FIP2Q7L804 512 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms