RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 EMILIN2Q9BXX0 1053 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 CEP44Q9C0F1 390 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 LATS2Q9NRM7 1088 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 GALPQ9UBC7 116 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 EVLQ9UI08 416 aaPredicted RBP11.81□□□□□ -0.52
NUP54-202ENST00000502850 AP3M1Q9Y2T2 418 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 TIMM22Q9Y584 194 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 ANGPTL3Q9Y5C1 460 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 SNX13Q9Y5W8 968 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 PTGDR2Q9Y5Y4 395 aa11.81□□□□□ -0.52
NUP54-202ENST00000502850 SLC28A1O00337 649 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 TEX28O15482 410 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 RGS14O43566 566 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 OR4F21O95013 312 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 FGF19O95750 216 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 ENO2P09104 434 aaPredicted RBP11.8□□□□□ -0.52
NUP54-202ENST00000502850 ALPIP09923 528 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 PSMC3P17980 439 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 NFKBIAP25963 317 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 DIO3P55073 304 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 LMAN2Q12907 356 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 CYP2R1Q6VVX0 501 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 ZFAND4Q86XD8 727 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 PROSER1Q86XN7 944 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 NXPE1Q8N323 547 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 TCAIMQ8N3R3 496 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 AADATQ8N5Z0 425 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 DPP10Q8N608 796 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 CDYL2Q8N8U2 506 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 SMIM14Q96QK8 99 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 SLC22A12Q96S37 553 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 ZBTB18Q99592 522 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 ALG2Q9H553 416 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 NOL11Q9H8H0 719 aaKnown RBP11.8□□□□□ -0.52
NUP54-202ENST00000502850 KCTD5Q9NXV2 234 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 WWOXQ9NZC7 414 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 CFAP97Q9P2B7 532 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 OPTCQ9UBM4 332 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 SLC25A13Q9UJS0 675 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 PCDHA9Q9Y5H5 950 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
NUP54-202ENST00000502850 LAMA3Q16787 3333 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 PABPN1LA6NDY0 278 aaKnown RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 ZNF839A8K0R7 811 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 GRM6O15303 877 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 AKAP10O43572 662 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 KATNA1O75449 491 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 BAIAP3O94812 1187 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 SLC25A14O95258 325 aaPredicted RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 CAPN1P07384 714 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 ZNF26P17031 533 aaPredicted RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 JAK1P23458 1154 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 FASP25445 335 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 DDX6P26196 483 aaKnown RBP eCLIP11.79□□□□□ -0.52
NUP54-202ENST00000502850 HNF1BP35680 557 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 RPL5P46777 297 aaKnown RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 ERVPABLB-1P60509 514 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 CREB5Q02930 508 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 NR6A1Q15406 480 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 MTX3Q5HYI7 312 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 TBCELQ5QJ74 424 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 INTS11Q5TA45 600 aaKnown RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 SLC30A9Q6PML9 568 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 IL27RAQ6UWB1 636 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 TPRG1Q6ZUI0 275 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 MILR1Q7Z6M3 343 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 FAM9CQ8IZT9 166 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 APCDD1Q8J025 514 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 SNX31Q8N9S9 440 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 GLB1L3Q8NCI6 653 aaPredicted RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 WFDC5Q8TCV5 224 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 ZFAND2BQ8WV99 257 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 LRTOMTQ8WZ04 291 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 POP5Q969H6 163 aaKnown RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 TMEM125Q96AQ2 219 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 CNBD2Q96M20 576 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 PLEKHG4BQ96PX9 1271 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 EGFL8Q99944 293 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 KCTD14Q9BQ13 255 aaPredicted RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 SLC39A3Q9BRY0 314 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 HAUS8Q9BT25 410 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 C9orf16Q9BUW7 83 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 SLC29A3Q9BZD2 475 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 ZBP1Q9H171 429 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 IL1RL2Q9HB29 575 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 IL26Q9NPH9 171 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 SLC52A3Q9NQ40 469 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 CMTM6Q9NX76 183 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 GIMAP2Q9UG22 337 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 TRPS1Q9UHF7 1281 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 ZNF225Q9UK10 706 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 PTBP2Q9UKA9 531 aaKnown RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
NUP54-202ENST00000502850 HS3ST2Q9Y278 367 aa11.79□□□□□ -0.52
NUP54-202ENST00000502850 PPIL1Q9Y3C6 166 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms