RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ASLP04424 464 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 INHAP05111 366 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 ENO2P09104 434 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 MYF6P23409 242 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 CSKP41240 450 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 EMX2Q04743 252 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 MERTKQ12866 999 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PRKG2Q13237 762 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 BFSP2Q13515 415 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 GTF2H2Q13888 395 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 SELPLGQ14242 412 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 FXNQ16595 210 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 SLC36A3Q495N2 470 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 INO80DQ53TQ3 878 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 GTF2H2CQ6P1K8 395 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 ADAMTSL2Q86TH1 951 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 RNF168Q8IYW5 571 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 RAET1EQ8TD07 263 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PIH1D2Q8WWB5 315 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 MYO19Q96H55 970 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PDLIM5Q96HC4 596 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 SCLYQ96I15 445 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 CIPCQ9C0C6 399 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 NSUN3Q9H649 340 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 CLK4Q9HAZ1 481 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PFDN4Q9NQP4 134 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 ELOVL2Q9NXB9 296 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 AFF4Q9UHB7 1163 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 ANAPC2Q9UJX6 822 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 NEUROG3Q9Y4Z2 214 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 POLR3HQ9Y535 204 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 OR51B4Q9Y5P0 310 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 BACE2Q9Y5Z0 518 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PRSS21Q9Y6M0 314 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 TYW5A2RUC4 315 aaKnown RBP9.71□□□□□ -0.85
CLIP1-204ENST00000501271 ANKRD28O15084 1053 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 FFAR2O15552 330 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 PGLSO95336 258 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 GUCA1CO95843 209 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 FCGR1AP12314 374 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 HTR1EP28566 365 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 HSPA7P48741 367 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 ALDH7A1P49419 539 aaKnown RBP9.71□□□□□ -0.85
CLIP1-204ENST00000501271 SMAD3P84022 425 aaKnown RBP9.71□□□□□ -0.85
CLIP1-204ENST00000501271 ZXDBP98169 803 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 TRAF3Q13114 568 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 ABRAXAS2Q15018 415 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 NR6A1Q15406 480 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 TMTC4Q5T4D3 741 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 CYP20A1Q6UW02 462 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 DLEU7Q6UYE1 221 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 ZNF783Q6ZMS7 281 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 TMEM150AQ86TG1 271 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 SERPINA9Q86WD7 417 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 RALGPS2Q86X27 583 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-204ENST00000501271 DPP10Q8N608 796 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 CLDN19Q8N6F1 224 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 PDPRQ8NCN5 879 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 PAPD5Q8NDF8 572 aaKnown RBP9.71□□□□□ -0.85
CLIP1-204ENST00000501271 TTC16Q8NEE8 873 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 HM13Q8TCT9 377 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 ALG14Q96F25 216 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 FBXL20Q96IG2 436 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 HIC2Q96JB3 615 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 PPM1MQ96MI6 270 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 LRRC3Q9BY71 257 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 MAGEE1Q9HCI5 957 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 STOML2Q9UJZ1 356 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 SLC8A2Q9UPR5 921 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.85
CLIP1-204ENST00000501271 TAPBPO15533 448 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 SMAD6O43541 496 aaKnown RBP9.71□□□□□ -0.86
CLIP1-204ENST00000501271 ABLIM3O94929 683 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 MBL2P11226 248 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-204ENST00000501271 GKP32189 559 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 DGKQP52824 942 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 MTPNP58546 118 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 TUBA4AP68366 448 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 TAF12Q16514 161 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 KCTD21Q4G0X4 260 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 RFTN2Q52LD8 501 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-204ENST00000501271 ARMC12Q5T9G4 340 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 PTRHD1Q6GMV3 140 aaKnown RBP9.71□□□□□ -0.86
CLIP1-204ENST00000501271 KIAA1841Q6NSI8 718 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 HID1Q8IV36 788 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF786Q8N393 782 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF461Q8TAF7 563 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 BIRC7Q96CA5 298 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 SEPHS2Q99611 448 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 CLPBQ9H078 707 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 IPPKQ9H8X2 491 aa9.71□□□□□ -0.86
CLIP1-204ENST00000501271 RSL24D1Q9UHA3 163 aaKnown RBP9.71□□□□□ -0.86
CLIP1-204ENST00000501271 PLXNB3Q9ULL4 1909 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 GREM1O60565 184 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 SEC24DO94855 1032 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-204ENST00000501271 BMP10O95393 424 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 PLIN5Q00G26 463 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 PHKG1Q16816 387 aa9.7□□□□□ -0.86
CLIP1-204ENST00000501271 AP5B1Q2VPB7 878 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms