RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 POLR1CO15160 346 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 PSMD3O43242 534 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 LDB2O43679 373 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 KRT86O43790 486 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 RAD1O60671 282 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 RASSF9O75901 435 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 METTL18O95568 372 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 RALBP11234 206 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 WT1P19544 449 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 ITGALP20701 1170 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 CAPZBP47756 277 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 LEPRP48357 1165 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 SEPHS1P49903 392 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 GSDMDP57764 484 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 FOXM1Q08050 763 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 PLCL1Q15111 1095 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 RPE65Q16518 533 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 BCL7AQ4VC05 210 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 SEL1L2Q5TEA6 688 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 METRNLQ641Q3 311 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 IRGCQ6NXR0 463 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 SNX20Q7Z614 316 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 NLGN4XQ8N0W4 816 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 NLGN4YQ8NFZ3 816 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 GPR150Q8NGU9 434 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 OR2L2Q8NH16 312 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 NAT14Q8WUY8 206 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 RSC1A1Q92681 617 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 ULK4Q96C45 1275 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 MED8Q96G25 268 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 DCUN1D1Q96GG9 259 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 ZDHHC12Q96GR4 267 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 LINC00615Q96LM1 132 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 C12orf66Q96MD2 445 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 SEMA4CQ9C0C4 833 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 RAB33BQ9H082 229 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 WWP1Q9H0M0 922 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 LRRC40Q9H9A6 602 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 APMAPQ9HDC9 416 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 IMP3Q9NV31 184 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 SIDT1Q9NXL6 827 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 PILRAQ9UKJ1 303 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 GUCA1BQ9UMX6 200 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 MGAQ8IWI9 3026 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 CFAP99D6REC4 459 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 H7C0S8 307 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 CCL22O00626 93 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 SGTAO43765 313 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 STK17BO94768 372 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 AP2A1O95782 977 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ITGB2P05107 769 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 SLC35G4P0C7Q5 338 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 MTHFD1P11586 935 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ATP1B2P14415 290 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 LIFP15018 202 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 TPH1P17752 444 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 MAP4P27816 1152 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 STIP1P31948 543 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 MC4RP32245 332 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 PRLHRP49683 370 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 SEPT6Q14141 434 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 POU6F1Q14863 301 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 LINC00303Q3SY05 128 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 GPR33Q49SQ1 333 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ZRANB3Q5FWF4 1079 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 CACHD1Q5VU97 1274 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 CYB5D1Q6P9G0 228 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 KLHL35Q6PF15 583 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 FAM92BQ6ZTR7 304 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 PRSS42Q7Z5A4 293 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ZNF605Q86T29 641 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 NXPE1Q8N323 547 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 TAB3Q8N5C8 712 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 STYXQ8WUJ0 223 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 HEXDCQ8WVB3 486 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 UBE2Q2Q8WVN8 375 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ATG4AQ8WYN0 398 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 EXTL1Q92935 676 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 KIAA1143Q96AT1 154 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 DNAJC1Q96KC8 554 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 OR6C1Q96RD1 312 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 INSM2Q96T92 566 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 COPS8Q99627 209 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 SPRY4Q9C004 299 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 TRIT1Q9H3H1 467 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 FAM96AQ9H5X1 160 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 NLE1Q9NVX2 485 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 FAM8A1Q9UBU6 413 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 EPHA6Q9UF33 1036 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ACSL5Q9ULC5 683 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 TMEM184BQ9Y519 407 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 CFAP20Q9Y6A4 193 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 AHCTF1Q8WYP5 2266 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 ATMQ13315 3056 aa8.29□□□□□ -1.08
HMGXB4-207ENST00000498212 TRBV5-4A0A0C4DH59 114 aa8.28□□□□□ -1.08
HMGXB4-207ENST00000498212 C17orf113A0A1B0GUU1 675 aa8.28□□□□□ -1.08
HMGXB4-207ENST00000498212 ERI2A8K979 691 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms