RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TUBB1Q9H4B7 451 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 MAGEL2Q9UJ55 1249 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 GMPPBQ9Y5P6 360 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM92AA1XBS5 289 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 ASB14A6NK59 587 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 CDK2AP1O14519 115 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 HAT1O14929 419 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 AREL1O15033 823 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 DIRAS1O95057 198 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 IMPDH1P20839 514 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 UQCRC1P31930 480 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SNX16P57768 344 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 NKG7Q16617 165 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 AAK1Q2M2I8 961 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 Q5BKY6 102 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 BRMS1LQ5PSV4 323 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 CTU1Q7Z7A3 348 aaKnown RBP12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 EGLN2Q96KS0 407 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 LRRC3Q9BY71 257 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 QPCTLQ9NXS2 382 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM25AB3EWG3 89 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM25CB3EWG5 89 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM25GB3EWG6 89 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 PGK2P07205 417 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC15A1P46059 708 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 FCHO2Q0JRZ9 810 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 GIPC2Q8TF65 315 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 MMP27Q9H306 513 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SDR39U1Q9NRG7 319 aaPredicted RBP12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 OR51F1A6NGY5 319 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 KRT6AP02538 564 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 KRT6BP04259 564 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 CYP11A1P05108 521 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 CBLP22681 906 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 IGFBP5P24593 272 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 LIPAP38571 399 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 EEFSECP57772 596 aaKnown RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 POU4F1Q01851 419 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 ACOX1Q15067 660 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 HECTD2Q5U5R9 776 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 RAB43Q86YS6 212 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 GLB1L3Q8NCI6 653 aaPredicted RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 TBL1YQ9BQ87 522 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 DNAJB9Q9UBS3 223 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 NDUFV1P49821 464 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 ATP4BP51164 291 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 CBX2Q14781 532 aaPredicted RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 NFE2Q16621 373 aaPredicted RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 RIMKLAQ8IXN7 391 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 RNF34Q969K3 372 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 SIK2Q9H0K1 926 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 AKT3Q9Y243 479 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 CITO14578 2027 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 METTL15A6NJ78 407 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 CSF2P04141 144 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 PAMP19021 973 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 OR3A3P47888 321 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 FCGRTP55899 365 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 RBP5P82980 135 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF691Q5VV52 312 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 PAPD5Q8NDF8 572 aaKnown RBP12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 GRPEL2Q8TAA5 225 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC2A14Q8TDB8 520 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 CDHR1Q96JP9 859 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 UGT2B28Q9BY64 529 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
GAPVD1-220ENST00000497580 hCG_2039718K7EN88 272 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PRSS23O95084 383 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 CYP2C8P10632 490 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 CD6P30203 668 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PTGS2P35354 604 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC26A3P40879 764 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 ITKQ08881 620 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 STXBP2Q15833 593 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 RBBP7Q16576 425 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 LRRC26Q2I0M4 334 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 LAIR1Q6GTX8 287 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 OR2T12Q8NG77 320 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PTERQ96BW5 349 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 ST6GAL2Q96JF0 529 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 KIFC1Q9BW19 673 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 TEX13BQ9BXU2 312 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 MKRN2Q9H000 416 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 EXOSC4Q9NPD3 245 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PIGVQ9NUD9 493 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms