RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CD1DP15813 335 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 CHRM3P20309 590 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 LSP1P33241 339 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TRIM23P36406 574 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 ATP6V0D1P61421 351 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 GNGT1P63211 74 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 PPARDQ03181 441 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TMEM115Q12893 351 aaPredicted RBP13.97□□□□□ -0.17
VPS26A-209ENST00000497564 SGCGQ13326 291 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 CSHL1Q14406 222 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 IRF4Q15306 451 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TECRLQ5HYJ1 363 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TBC1D3GQ6DHY5 549 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TBC1D3CQ6IPX1 549 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 KLC3Q6P597 504 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 PAQR3Q6TCH7 311 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TBC1D3Q8IZP1 549 aaPredicted RBP13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TMEM151AQ8N4L1 468 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 GDAP1Q8TB36 358 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 RAB3IL1Q8TBN0 382 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 LKAAEAR1Q8TD35 194 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 HIC2Q96JB3 615 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TEX101Q9BY14 249 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TRIM39Q9HCM9 518 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 SPATS2LQ9NUQ6 558 aaKnown RBP13.97□□□□□ -0.17
VPS26A-209ENST00000497564 TMEM74BQ9NUR3 256 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 SIRPGQ9P1W8 387 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 PCDHGA5Q9Y5G8 931 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 PI4KAP42356 2102 aa13.97□□□□□ -0.17
VPS26A-209ENST00000497564 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 IQCF5A8MTL0 148 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 KPNA5O15131 536 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 VEGFDO43915 354 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 DNAJC6O75061 913 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 ZNF217O75362 1048 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 TSPAN12O95859 305 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 FTH1P02794 183 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 RBP1P09455 135 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 GSTM1P09488 218 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 CBSLP0DN79 551 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 ITPKAP23677 461 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 ACSL1P33121 698 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 CBSP35520 551 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 PRLHRP49683 370 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 IL2P60568 153 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 PPP2CBP62714 309 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 PPP2CAP67775 309 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 GSTM4Q03013 218 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 GBX1Q14549 363 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 TTLL9Q3SXZ7 439 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 BCL7AQ4VC05 210 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 TTC19Q6DKK2 380 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 LPCAT2Q7L5N7 544 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 FAM124AQ86V42 546 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 C11orf74Q86VG3 221 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 TRIM42Q8IWZ5 723 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 FSTL5Q8N475 847 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 ZBTB2Q8N680 514 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 RASGEF1AQ8N9B8 481 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 PLA2G15Q8NCC3 412 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 RHEBL1Q8TAI7 183 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 PIGKQ92643 395 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 ZNF514Q96K75 400 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 PAIP2Q9BPZ3 127 aaKnown RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 TFB2MQ9H5Q4 396 aaKnown RBP13.96□□□□□ -0.17
VPS26A-209ENST00000497564 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 COPG2Q9UBF2 871 aa13.96□□□□□ -0.17
VPS26A-209ENST00000497564 GPR89AB7ZAQ6 455 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 G3V2L1 256 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 KLF11O14901 512 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 INPP4BO15327 924 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 LATO43561 262 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 RRP9O43818 475 aaKnown RBP13.95□□□□□ -0.18
VPS26A-209ENST00000497564 TRIM16O95361 564 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 SEMA4FO95754 770 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 PAK4O96013 591 aaPredicted RBP13.95□□□□□ -0.18
VPS26A-209ENST00000497564 PCCBP05166 539 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 HOXC4P09017 264 aaPredicted RBP13.95□□□□□ -0.18
VPS26A-209ENST00000497564 SBK3P0C264 359 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 GPR89BP0CG08 455 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 DGKAP23743 735 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 AOAHP28039 575 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 NUDT1P36639 197 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 RGS4P49798 205 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 CCR5P51681 352 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 CDK3Q00526 305 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 PCLAFQ15004 111 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 PLEKHS1Q5SXH7 462 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 ZYG11AQ6WRX3 759 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 ADGRG6Q86SQ4 1221 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 ISCA2Q86U28 154 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 TAX1BP1Q86VP1 789 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 HEATR4Q86WZ0 1026 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 SGF29Q96ES7 293 aa13.95□□□□□ -0.18
VPS26A-209ENST00000497564 TOE1Q96GM8 510 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms