RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 AXIN2Q9Y2T1 843 aa8.1□□□□□ -1.11
CRNKL1-205ENST00000496549 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SLC15A5A6NIM6 579 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CLDN24A6NM45 220 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MT-ND2P03891 347 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 HLA-DOAP06340 250 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 C2P06681 752 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 FABP1P07148 127 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ERVK-10P10266 1014 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SLC2A3P11169 496 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 NCK1P16333 377 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PAMP19021 973 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 STOMP27105 288 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CA5AP35218 305 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PTPN7P35236 360 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 GMPRP36959 345 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 HNMTP50135 292 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PRELPP51888 382 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 STX4Q12846 297 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TEAD4Q15561 434 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 HSF5Q4G112 596 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 DDI2Q5TDH0 399 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 OR6B2Q6IFH4 312 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SLC22A9Q8IVM8 553 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TCTE3Q8IZS6 198 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 RBFAQ8N0V3 343 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MAPK15Q8TD08 544 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 HAS1Q92839 578 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 OPALINQ96PE5 141 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 RBM14Q96PK6 669 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PPP1R16BQ96T49 567 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 C2orf40Q9H1Z8 148 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 C8orf33Q9H7E9 229 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 LRRC4Q9HBW1 653 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MED11Q9P086 117 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SEC14L4Q9UDX3 406 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 FMN2Q9NZ56 1722 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 METTL15A6NJ78 407 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 INMT-MINDY4F8WBC2 141 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 K7ERI5 159 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SLC16A4O15374 487 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 LSM8O95777 96 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MGAT1P26572 445 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 AVPR1AP37288 418 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MEOX2P50222 304 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 RPL7AP62424 266 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 FPGSQ05932 587 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 DSG2Q14126 1118 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MED22Q15528 200 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TSNQ15631 228 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 STXBP2Q15833 593 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CTF1Q16619 201 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ANGPTL8Q6UXH0 198 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CDH26Q8IXH8 852 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PIAS4Q8N2W9 510 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TP53I13Q8NBR0 393 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CHDHQ8NE62 594 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 BPIFB1Q8TDL5 484 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CHAC2Q8WUX2 184 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 POP5Q969H6 163 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 DUS3LQ96G46 650 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 APOL2Q9BQE5 337 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 AMNQ9BXJ7 453 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ZNF518BQ9C0D4 1074 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ZBTB20Q9HC78 741 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 RASSF1Q9NS23 344 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TAS2R7Q9NYW3 318 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PTTG3PQ9NZH4 202 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ADORA3P0DMS8 318 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 OGNP20774 298 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TRIM28Q13263 835 aaKnown RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SLAMF1Q13291 335 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ZSWIM7Q19AV6 140 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 FAM102AQ5T9C2 384 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 AFTPHQ6ULP2 937 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 MON1BQ7L1V2 547 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 GPD1LQ8N335 351 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 RYBPQ8N488 228 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 KCT2Q8NC54 265 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ZNF778Q96MU6 729 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 CSF3RQ99062 836 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 PFDN5Q99471 154 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 IL22Q9GZX6 179 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 XKR8Q9H6D3 395 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 FOLH1BQ9HBA9 442 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 SMURF1Q9HCE7 757 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 ZNF624Q9P2J8 865 aaPredicted RBP8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 GINS2Q9Y248 185 aa8.09□□□□□ -1.11
CRNKL1-205ENST00000496549 TRAV6A0A075B6T7 132 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF487B1APH4 448 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ALDH1A2O94788 518 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC2A2P11168 524 aaPredicted RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 LBPP18428 481 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ATP5F1P24539 256 aaPredicted RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 DNAJB1P25685 340 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms