RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 APOC2P02655 101 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 C9P02748 559 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 COX6B1P14854 86 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 MX2P20592 715 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 LPOP22079 712 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 SERPINA4P29622 427 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 CSNK1DP48730 415 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 NR2C2P49116 596 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 NSUN2Q08J23 767 aaKnown RBP eCLIP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 NIPAL4Q0D2K0 466 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 WASHC5Q12768 1159 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ZBTB17Q13105 803 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ART3Q13508 389 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 SIX1Q15475 284 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 CRB2Q5IJ48 1285 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ZNF569Q5MCW4 686 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 VWA5B1Q5TIE3 1220 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ZNF517Q6ZMY9 492 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 SLC9B2Q86UD5 537 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 FJX1Q86VR8 437 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ATPAF2Q8N5M1 289 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 PAF1Q8N7H5 531 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ARRDC2Q8TBH0 407 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ACTL9Q8TC94 416 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ADAMTS17Q8TE56 1095 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 HAUS1Q96CS2 278 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 TGM7Q96PF1 710 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 WDR24Q96S15 920 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 FAM118BQ9BPY3 351 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 MGME1Q9BQP7 344 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 TRIM8Q9BZR9 551 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ATP13A3Q9H7F0 1226 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 SP110Q9HB58 689 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 NTNG1Q9Y2I2 539 aa10.09□□□□□ -0.79
C9orf78-207ENST00000495934 KLF2Q9Y5W3 355 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-207ENST00000495934 ACANP16112 2415 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 TRAFD1O14545 582 aaPredicted RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 TOX3O15405 576 aaPredicted RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 RASSF9O75901 435 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 JCHAINP01591 159 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 ATP1A1P05023 1023 aaKnown RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 SPTBP11277 2137 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 CXCR5P32302 372 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 MAXP61244 160 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 IFI35P80217 286 aaPredicted RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 LRP8Q14114 963 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 PDK1Q15118 436 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 NOMO1Q15155 1222 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 PYCR3Q53H96 274 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 ODF2Q5BJF6 829 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 MARC1Q5VT66 337 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 DENND2CQ68D51 928 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 ALG1LQ6GMV1 187 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 RAET1GQ6H3X3 334 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 IYDQ6PHW0 289 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 MARK2Q7KZI7 788 aaKnown RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 SRLQ86TD4 932 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 CDH24Q86UP0 819 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 SLC13A5Q86YT5 568 aaPredicted RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 NXPE1Q8N323 547 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 GLIS1Q8NBF1 620 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 CCNYQ8ND76 341 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 SLC35B2Q8TB61 432 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 P3H4Q92791 437 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 INPP5DQ92835 1189 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 SCARF2Q96GP6 870 aaPredicted RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 ALS2CR12Q96Q35 445 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 CEP41Q9BYV8 373 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 CARD9Q9H257 536 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 NOD2Q9HC29 1040 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 AGPAT4Q9NRZ5 378 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 RBM22Q9NW64 420 aaKnown RBP eCLIP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 C5AR2Q9P296 337 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 B4GALT6Q9UBX8 382 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 FARSAQ9Y285 508 aaKnown RBP10.08□□□□□ -0.8
C9orf78-207ENST00000495934 TMEM98Q9Y2Y6 226 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 JRKLQ9Y4A0 524 aa10.08□□□□□ -0.8
C9orf78-207ENST00000495934 LILRA5A6NI73 299 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 TJP3O95049 919 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 NADKO95544 446 aaPredicted RBP10.07□□□□□ -0.8
C9orf78-207ENST00000495934 HLA-DQB2P05538 268 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 MMP2P08253 660 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 BPIP17213 487 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 TEAD1P28347 426 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 CD68P34810 354 aaPredicted RBP10.07□□□□□ -0.8
C9orf78-207ENST00000495934 ETV3P41162 512 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 MMP13P45452 471 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 GLRBP48167 497 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 RENBPP51606 427 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 POLR2LP62875 67 aaKnown RBP10.07□□□□□ -0.8
C9orf78-207ENST00000495934 OTUD4Q01804 1114 aaKnown RBP10.07□□□□□ -0.8
C9orf78-207ENST00000495934 DSC2Q02487 901 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 XRCC4Q13426 336 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 CNGA3Q16281 694 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 KYNUQ16719 465 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 LYPLAL1Q5VWZ2 237 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 PWWP2BQ6NUJ5 590 aa10.07□□□□□ -0.8
C9orf78-207ENST00000495934 CYB5D1Q6P9G0 228 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms