RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	PLA2G4E	Q3MJ16	856 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	DCAF12	Q5T6F0	453 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	PACS1	Q6VY07	963 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	NLRP9	Q7RTR0	991 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ZNF761	Q86XN6	746 aa	Predicted RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	JAML	Q86YT9	394 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	TRIM48	Q8IWZ4	208 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CARF	Q8N187	725 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	HM13	Q8TCT9	377 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	KLHL6	Q8WZ60	621 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CXorf40B	Q96DE9	158 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	SGF29	Q96ES7	293 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CDKN2AIPNL	Q96HQ2	116 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	NAF1	Q96HR8	494 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	BBC3	Q96PG8	261 aa	Predicted RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CCM2	Q9BSQ5	444 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ZNF768	Q9H5H4	540 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ETNK1	Q9HBU6	452 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	EIF2B3	Q9NR50	452 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	HOMER3	Q9NSC5	361 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ZDHHC3	Q9NYG2	299 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	PAK5	Q9P286	719 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ZNF148	Q9UQR1	794 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	SLC30A1	Q9Y6M5	507 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	HEATR9	A2RTY3	570 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	GOLGA6L3	A6NEY3	463 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	AP3B1	O00203	1094 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	QSOX1	O00391	747 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	MTHFD1	P11586	935 aa	Known RBP	10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	NDUFS1	P28331	727 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	MC4R	P32245	332 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CD151	P48509	253 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	MAPK10	P53779	464 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	DRG2	P55039	364 aa	Known RBP	10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CACNG1	Q06432	222 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	RPA4	Q13156	261 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	MAP7	Q14244	749 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	ITIH4	Q14624	930 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	FNBP1L	Q5T0N5	605 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	KLHL35	Q6PF15	583 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	PCSK4	Q6UW60	755 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CEACAM20	Q6UY09	585 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CCDC81	Q6ZN84	652 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	TTC9	Q92623	222 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	ART4	Q93070	314 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	DCUN1D1	Q96GG9	259 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	ZDHHC12	Q96GR4	267 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	DNAJC1	Q96KC8	554 aa	Known RBP	10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CD180	Q99467	661 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	VPS37B	Q9H9H4	285 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CPNE5	Q9HCH3	593 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	LZTFL1	Q9NQ48	299 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CASS4	Q9NQ75	786 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	OCIAD1	Q9NX40	245 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	SLC39A1	Q9NY26	324 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	CRLS1	Q9UJA2	301 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	PILRA	Q9UKJ1	303 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	PPP2R2C	Q9Y2T4	447 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	PCDHB11	Q9Y5F2	797 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	B3GALT1	Q9Y5Z6	326 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	PIKFYVE	Q9Y2I7	2098 aa		10.06	□□□□□ -0.8
NEPRO-222	ENST00000494891	EFCAB7	A8K855	629 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	CAPN5	O15484	640 aa	Predicted RBP	10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	ITGB2	P05107	769 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	AMD1	P17707	334 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	ADRA1D	P25100	572 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	NSG1	P42857	185 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	CDK16	Q00536	496 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	IL11RA	Q14626	422 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	POU6F1	Q14863	301 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	SEPT7	Q16181	437 aa	Known RBP	10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	LYPLAL1	Q5VWZ2	237 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	CYB5D1	Q6P9G0	228 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	CERS6	Q6ZMG9	384 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	BPHL	Q86WA6	291 aa	Predicted RBP	10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	SERPINA9	Q86WD7	417 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	ZFAND4	Q86XD8	727 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	KMT5C	Q86Y97	462 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	PIANP	Q8IYJ0	282 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	OR52K1	Q8NGK4	314 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	OR13J1	Q8NGT2	312 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	GPR150	Q8NGU9	434 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	C1orf54	Q8WWF1	131 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	UBXN4	Q92575	508 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	NKD1	Q969G9	470 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	SLC41A2	Q96JW4	573 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	FCRL4	Q96PJ5	515 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	TRIT1	Q9H3H1	467 aa	Known RBP	10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	KIR3DX1	Q9H7L2	352 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	HEBP2	Q9Y5Z4	205 aa		10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	FASN	P49327	2511 aa	Known RBP	10.05	□□□□□ -0.8
NEPRO-222	ENST00000494891	LIN7A	O14910	233 aa	Predicted RBP	10.04	□□□□□ -0.8
NEPRO-222	ENST00000494891	GAS8	O95995	478 aa		10.04	□□□□□ -0.8
NEPRO-222	ENST00000494891	IFNB1	P01574	187 aa		10.04	□□□□□ -0.8
NEPRO-222	ENST00000494891	FGG	P02679	453 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms