RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 HSPA1AP0DMV8 641 aaKnown RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 HSPA1BP0DMV9 641 aaKnown RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 PTPN2P17706 415 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 ATP6V1C1P21283 382 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SLC7A2P52569 658 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 ATP6V0D1P61421 351 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 AP2B1P63010 937 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 GK3PQ14409 553 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 CARD16Q5EG05 197 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 RAB44Q7Z6P3 723 aaPredicted RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 DHDDSQ86SQ9 333 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SFRP1Q8N474 314 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 FRS2Q8WU20 508 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 NRTNQ99748 197 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SEMA6AQ9H2E6 1030 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 HELZP42694 1942 aaKnown RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 TRBV5-4A0A0C4DH59 114 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 A0A1W2PQ67 120 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 PRRT4C9JH25 899 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 CRCPO75575 148 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 LMNAP02545 664 aaKnown RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 UBTFL6P0CB48 400 aaPredicted RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SPAM1P38567 509 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 CASP2P42575 452 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SNRPD1P62314 119 aaKnown RBP10.23□□□□□ -0.77
SAMM50-206ENST00000494795 HMGCS1Q01581 520 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SATB1Q01826 763 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SQLEQ14534 574 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 RABL3Q5HYI8 236 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 FRA10AC1Q70Z53 315 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 TRIM74Q86UV6 250 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 VN1R2Q8NFZ6 395 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 TMEM74Q96NL1 305 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 LATS2Q9NRM7 1088 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 HACD3Q9P035 362 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SUN2Q9UH99 717 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 IRAK3Q9Y616 596 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 DOCK9Q9BZ29 2069 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 TCF20Q9UGU0 1960 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 FADS2P1A8MWK0 482 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 FXYD1O00168 92 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 RFXAPO00287 272 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 NRP2O60462 931 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ESRRBO95718 433 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 C1QCP02747 245 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ZNF7P17097 686 aaPredicted RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 TRIP10Q15642 601 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 RFTN2Q52LD8 501 aaPredicted RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 C6orf10Q5SRN2 563 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 C6orf163Q5TEZ5 329 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 IL23RQ5VWK5 629 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 TPRG1Q6ZUI0 275 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 DNAJC5GQ8N7S2 189 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 PKP2Q99959 881 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 TRMOQ9BU70 441 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 MRPL1Q9BYD6 325 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 RNF11Q9Y3C5 154 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 RNASEH2AO75792 299 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 EPORP19235 508 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ITGALP20701 1170 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 EPHA5P54756 1037 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 BOP1Q14137 746 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ARMC3Q5W041 872 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 IL27RAQ6UWB1 636 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 C16orf89Q6UX73 402 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 RBFAQ8N0V3 343 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 DNAJB14Q8TBM8 379 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 SKA2Q8WVK7 121 aaPredicted RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 RSRC1Q96IZ7 334 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 EGFL8Q99944 293 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ACTL8Q9H568 366 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 IPPKQ9H8X2 491 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ERVW-1Q9UQF0 538 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 GPR45Q9Y5Y3 372 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 NME4O00746 187 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 PRAMEF4O60810 478 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 SOCS5O75159 536 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 GCKP35557 465 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 NEK2P51955 445 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 DGKQP52824 942 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ADARP55265 1226 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 TRAF3Q13114 568 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 GTF2H2Q13888 395 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 CCSMST1Q4G0I0 132 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 PRAMEF9Q5VWM5 478 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 GTF2H2CQ6P1K8 395 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 GPRIN3Q6ZVF9 776 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ZBTB2Q8N680 514 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 SLCO4A1Q96BD0 722 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 WRAP53Q9BUR4 548 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 SPATA16Q9BXB7 569 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 PCDH12Q9NPG4 1184 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 INTS7Q9NVH2 962 aaKnown RBP10.22□□□□□ -0.77
SAMM50-206ENST00000494795 ST14Q9Y5Y6 855 aa10.22□□□□□ -0.77
SAMM50-206ENST00000494795 MYOCOSA0A1B0GUC4 107 aa10.21□□□□□ -0.77
SAMM50-206ENST00000494795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.21□□□□□ -0.77
SAMM50-206ENST00000494795 K7ESM1 405 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms