RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 NR6A1Q15406 480 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 CERS6Q6ZMG9 384 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TPGS1Q6ZTW0 290 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 MILR1Q7Z6M3 343 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 CARM1Q86X55 608 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 ADGRG5Q8IZF4 528 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TSPAN14Q8NG11 270 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 ZFP28Q8NHY6 868 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 PDLIM5Q96HC4 596 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 EGFL8Q99944 293 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 VCX3AQ9NNX9 186 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 IL26Q9NPH9 171 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 CLEC4EQ9ULY5 219 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TNPO3Q9Y5L0 923 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 RAD51BO15315 384 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 BNIP3LO60238 219 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 CA8P35219 290 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 PPP3CCP48454 512 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 DGKQP52824 942 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 PRKG2Q13237 762 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 PCBP2Q15366 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHMP3-209ENST00000494623 AP5B1Q2VPB7 878 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 NHSL2Q5HYW2 709 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 RETSATQ6NUM9 610 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 ADAMTSL2Q86TH1 951 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 TRIML2Q8N7C3 387 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 SH3GL3Q99963 347 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 EPB41L1Q9H4G0 881 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 ZIM2Q9NZV7 527 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 ANGPTL3Q9Y5C1 460 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 SLC4A7Q9Y6M7 1214 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 GAPDHSO14556 408 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-209ENST00000494623 TAPBPO15533 448 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 GREM1O60565 184 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 MT-ND1P03886 318 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 RPL10P27635 214 aaKnown RBP11.04□□□□□ -0.64
CHMP3-209ENST00000494623 HMOX2P30519 316 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 AP1S1P61966 158 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 NFATC2Q13469 925 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 RFTN2Q52LD8 501 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-209ENST00000494623 SNX20Q7Z614 316 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 DCAF4L2Q8NA75 395 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 TRPV3Q8NET8 790 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 PPM1MQ96MI6 270 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 SEPHS2Q99611 448 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 CCT7Q99832 543 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 C2orf49Q9BVC5 232 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-209ENST00000494623 ABCG8Q9H221 673 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 AGPAT4Q9NRZ5 378 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 ELOVL2Q9NXB9 296 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 DNMT3BQ9UBC3 853 aaKnown RBP11.04□□□□□ -0.64
CHMP3-209ENST00000494623 CRLS1Q9UJA2 301 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 GNPTGQ9UJJ9 305 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 GBF1Q92538 1859 aa11.04□□□□□ -0.64
CHMP3-209ENST00000494623 FFAR3O14843 346 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 GPR42O15529 346 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 H6PDO95479 791 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 TRBC1P01850 177 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 CXCL10P02778 98 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 SLC2A4P14672 509 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 ITGALP20701 1170 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 RGS4P49798 205 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 CYP4F8P98187 520 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 EMX2Q04743 252 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 LSAMPQ13449 338 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 APOFQ13790 326 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 CHRNA6Q15825 494 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 SGO1Q5FBB7 561 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 IRAK1BP1Q5VVH5 260 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 CYP20A1Q6UW02 462 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 ZFAND4Q86XD8 727 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 RBFAQ8N0V3 343 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 FAM47BQ8NA70 645 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 TFAP2CQ92754 450 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 CENPNQ96H22 339 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-209ENST00000494623 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 DEFB118Q96PH6 123 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 FAM126AQ9BYI3 521 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-209ENST00000494623 OLAHQ9NV23 265 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 HSFX1Q9UBD0 423 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 MYRFQ9Y2G1 1151 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 POLR3HQ9Y535 204 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-209ENST00000494623 INSL5Q9Y5Q6 135 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 GLYATL1P3A0A0U1RQE8 302 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 H3BSA7 217 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 OTCP00480 354 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 BPIP17213 487 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 DGKAP23743 735 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 MRPL19P49406 292 aaKnown RBP11.03□□□□□ -0.64
CHMP3-209ENST00000494623 NR1H2P55055 460 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 EEFSECP57772 596 aaKnown RBP11.03□□□□□ -0.64
CHMP3-209ENST00000494623 CREB5Q02930 508 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 RAB33AQ14088 237 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 PHKG1Q16816 387 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 EPHX4Q8IUS5 362 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 BIRC7Q96CA5 298 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF558Q96NG5 402 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 OAZ3Q9UMX2 235 aa11.03□□□□□ -0.64
CHMP3-209ENST00000494623 H3BNH8 94 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 LSM1O15116 133 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms