RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PDE7BQ9NP56 450 aa12.37□□□□□ -0.43
SKA1-205ENST00000494518 WASH6PQ9NQA3 447 aa12.37□□□□□ -0.43
SKA1-205ENST00000494518 KLHL8Q9P2G9 620 aaPredicted RBP12.37□□□□□ -0.43
SKA1-205ENST00000494518 EPHA6Q9UF33 1036 aa12.37□□□□□ -0.43
SKA1-205ENST00000494518 FAM153AQ9UHL3 310 aa12.37□□□□□ -0.43
SKA1-205ENST00000494518 CENPEQ02224 2701 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 GLYATL1P3A0A0U1RQE8 302 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 BLACEA4D250 179 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 SPOPO43791 374 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 CST8O60676 142 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 AKT1P31749 480 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 HMGCLP35914 325 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 UQCRFS1P47985 274 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 PMS2P54278 862 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 ADCY2Q08462 1091 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 XRCC4Q13426 336 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 GPR19Q15760 415 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 SLC14A2Q15849 920 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 FNBP1LQ5T0N5 605 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 GPRC6AQ5T6X5 926 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 TCTN3Q6NUS6 607 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 RHOT1Q8IXI2 618 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 OR8K1Q8NGG5 319 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 C10orf88Q9H8K7 445 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 FGF21Q9NSA1 209 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 IL17CQ9P0M4 197 aa12.36□□□□□ -0.43
SKA1-205ENST00000494518 MDC1Q14676 2089 aaKnown RBP12.36□□□□□ -0.43
SKA1-205ENST00000494518 LOC285095A0A1B0GVY8 99 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 UBA6A0AVT1 1052 aaPredicted RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 CLEC18AA5D8T8 446 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 ARGFXA6NJG6 315 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 GAPDHSO14556 408 aaPredicted RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 MT-ND3P03897 115 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 MTHFD1P11586 935 aaKnown RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 GP1BBP13224 206 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 COMTP21964 271 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 CDKN2BP42772 138 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 TNNT3P45378 269 aaPredicted RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 IL10RAQ13651 578 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 LDLRAP1Q5SW96 308 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 PRAMEF17Q5VTA0 474 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 FAM69BQ5VUD6 431 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 ATCAYQ86WG3 371 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 VSIG1Q86XK7 387 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 ZNF567Q8N184 647 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 CLEC18CQ8NCF0 446 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 BRSK1Q8TDC3 778 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 UBXN4Q92575 508 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 MR1Q95460 341 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 ZNF514Q96K75 400 aaPredicted RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 C12orf66Q96MD2 445 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 INSM2Q96T92 566 aaPredicted RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 ZCCHC2Q9C0B9 1178 aaKnown RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 NHEJ1Q9H9Q4 299 aaPredicted RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 ABHD10Q9NUJ1 306 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 HRASLS2Q9NWW9 162 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 DDX56Q9NY93 547 aaKnown RBP12.35□□□□□ -0.43
SKA1-205ENST00000494518 PCDHGA6Q9Y5G7 932 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 CACNA1DQ01668 2161 aa12.35□□□□□ -0.43
SKA1-205ENST00000494518 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 OR6C74A6NCV1 312 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 OR5K3A6NET4 321 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 TLCD2A6NGC4 264 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 TTLL8A6PVC2 850 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 C21orf140B9A014 251 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 SCRG1O75711 98 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 TPM3P06753 285 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 MSH3P20585 1137 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 MARCKSL1P49006 195 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 ACY1Q03154 408 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 DMPKQ09013 629 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 OLIG2Q13516 323 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 SEMA5AQ13591 1074 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 TFDP2Q14188 446 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 SLC1A5Q15758 541 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 NADK2Q4G0N4 442 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 LRRC38Q5VT99 294 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 KLHL35Q6PF15 583 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 PID1Q7Z2X4 250 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 DAAM2Q86T65 1068 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 TMEM126BQ8IUX1 230 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 RHOT2Q8IXI1 618 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 LILRA3Q8N6C8 439 aaPredicted RBP12.34□□□□□ -0.43
SKA1-205ENST00000494518 DDHD1Q8NEL9 900 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms