RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC31A1O15431 190 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 FFAR2O15552 330 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 IRAK2O43187 625 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 STX10O60499 249 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF202O95125 648 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 LUC7L3O95232 432 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 MOCS3O95396 460 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 LATS1O95835 1130 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 MT-CO3P00414 261 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 IGLV3-27P01718 113 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 SRPRAP08240 638 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 EPB41P11171 864 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CDK4P11802 303 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 EPHA8P29322 1005 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 APOBEC3AP31941 199 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 DRD3P35462 400 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ACTN2P35609 894 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 PRCPP42785 496 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 SYKP43405 635 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 RXRGP48443 463 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 KCNJ5P48544 419 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 MAPK10P53779 464 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ADPRHP54922 357 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 NXPH1P58417 271 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 TLE3Q04726 772 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 GALNT1Q10472 559 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CDH18Q13634 790 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 NFIL3Q16649 462 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ZCWPW2Q504Y3 356 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 TAF1BQ53T94 588 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 SLC45A4Q5BKX6 768 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CRB2Q5IJ48 1285 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 MS4A13Q5J8X5 152 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 FAM102AQ5T9C2 384 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ARHGAP40Q5TG30 622 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 RAP1GAP2Q684P5 730 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 NUGGCQ68CJ6 796 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ANKRD40Q6AI12 368 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 ATL3Q6DD88 541 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 MSANTD2Q6P1R3 559 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 TLDC1Q6P9B6 456 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 LCLAT1Q6UWP7 414 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 KRBA2Q6ZNG9 492 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 PRPF39Q86UA1 669 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CCDC117Q8IWD4 279 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 GUF1Q8N442 669 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 HJURPQ8NCD3 748 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 OR56A3Q8NH54 315 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 DQX1Q8TE96 717 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CCDC47Q96A33 483 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 AZIN2Q96A70 460 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 C18orf8Q96DM3 657 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 PRICKLE1Q96MT3 831 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 DDX50Q9BQ39 737 aaKnown RBP5.26□□□□□ -1.57
PTCD3-219ENST00000494323 STK33Q9BYT3 514 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CPNE5Q9HCH3 593 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 SARDHQ9UL12 918 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 KIAA1257Q9ULG3 409 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 FZD4Q9ULV1 537 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 TESMINQ9Y4I5 508 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 PAXBP1Q9Y5B6 917 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 PCDHGB3Q9Y5G1 929 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 RP1P56715 2156 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 TRPM6Q9BX84 2022 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 TENM4Q6N022 2769 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 MUC22E2RYF6 1773 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 SYNJ2BP-COX16A0A087WUM0 186 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TYW5A2RUC4 315 aaKnown RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 CLCA1A8K7I4 914 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF785A8K8V0 405 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TMEM233B4DJY2 109 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 C10orf142B7Z368 130 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 E9PLN8 166 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 M0QYV0 167 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 LATO43561 262 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 USP12O75317 370 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 UNC5CO95185 931 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 MT-ND5P03915 603 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ANXA2P07355 339 aaKnown RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 PDGFRAP16234 1089 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF18P17022 549 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TACR2P21452 398 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 DGKAP23743 735 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ACP1P24666 158 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 EEF1GP26641 437 aaKnown RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 NNMTP40261 264 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 YWHAEP62258 255 aaKnown RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 PITX1P78337 314 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 MXRA7P84157 204 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 E2F1Q01094 437 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 CFHR1Q03591 330 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ENPEPQ07075 957 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 CNTN1Q12860 1018 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 CTBP1Q13363 440 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 PNOCQ13519 176 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 LY6DQ14210 128 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TAF5Q15542 800 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 DLG2Q15700 870 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 EDRF1Q3B7T1 1238 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TBC1D25Q3MII6 688 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms