RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-231	ENST00000494043	NELL1	Q92832	810 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	NXNL1	Q96CM4	212 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	LINGO1	Q96FE5	620 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	SCARF2	Q96GP6	870 aa	Predicted RBP	11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	PDLIM5	Q96HC4	596 aa	Known RBP	11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	GPR78	Q96P69	363 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	DERL2	Q9GZP9	239 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	CNOT10	Q9H9A5	744 aa	Known RBP	11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	FGF22	Q9HCT0	170 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	AASDHPPT	Q9NRN7	309 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	ZNF358	Q9NW07	568 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	NKIRAS1	Q9NYS0	192 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	OGFR	Q9NZT2	677 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	SLC17A7	Q9P2U7	560 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	EMCN	Q9ULC0	261 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	GRID1	Q9ULK0	1009 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	RUVBL2	Q9Y230	463 aa	Known RBP	11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	PLLP	Q9Y342	182 aa		11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.21	□□□□□ -0.61
MCF2L-231	ENST00000494043	C17orf113	A0A1B0GUU1	675 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043		A0A1W2PR77	199 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PRSS38	A1L453	326 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	FAM86C2P	A6NEL3	165 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	MGAT4D	A6NG13	374 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	TNFRSF10C	O14798	259 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PLIN3	O60664	434 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	GPR37L1	O60883	481 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	GPC4	O75487	556 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	POP7	O75817	140 aa	Known RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	FUCA1	P04066	466 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PROC	P04070	461 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	APOA4	P06727	396 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	THEGL	P0DJG4	465 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ENO3	P13929	434 aa	Predicted RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	CD1D	P15813	335 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ATP1A2	P50993	1020 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ATP6V0D1	P61421	351 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	RACK1	P63244	317 aa	Known RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ARHGAP8	P85298	464 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PPARD	Q03181	441 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	SRSF5	Q13243	272 aa	Known RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PTK2B	Q14289	1009 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ACAP2	Q15057	778 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ZNF528	Q3MIS6	628 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PYCR3	Q53H96	274 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ACSBG2	Q5FVE4	666 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	WDR45B	Q5MNZ6	344 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PMS2CL	Q68D20	193 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	LRRC8E	Q6NSJ5	796 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	C16orf46	Q6P387	395 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	KLC3	Q6P597	504 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ENPP7	Q6UWV6	458 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ARMCX6	Q7L4S7	300 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	IQCH	Q86VS3	1027 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	GALNT13	Q8IUC8	556 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	SLC22A18AS	Q8N1D0	253 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	MFSD2A	Q8NA29	543 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	OR2L2	Q8NH16	312 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	C1orf216	Q8TAB5	229 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	MDM1	Q8TC05	714 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	DENND1A	Q8TEH3	1009 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	EEF1AKMT1	Q8WVE0	214 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ASZ1	Q8WWH4	475 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	DNASE2B	Q8WZ79	361 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	KLHDC7B	Q96G42	594 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PDXP	Q96GD0	296 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	FAM111A	Q96PZ2	611 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	TIMM29	Q9BSF4	260 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	UNK	Q9C0B0	810 aa	Known RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	MIR1-1HG	Q9H1L0	117 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	C12orf65	Q9H3J6	166 aa	Known RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	NMRAL1	Q9HBL8	299 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	TM9SF3	Q9HD45	589 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	TMEM216	Q9P0N5	145 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	GULP1	Q9UBP9	304 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	KL	Q9UEF7	1012 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	ZNHIT2	Q9UHR6	403 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	MOSPD1	Q9UJG1	213 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	SUFU	Q9UMX1	484 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	CDYL	Q9Y232	598 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	PRKAB1	Q9Y478	270 aa		11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.2	□□□□□ -0.62
MCF2L-231	ENST00000494043	SLC5A10	A0PJK1	596 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	KLHL33	A6NCF5	533 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	LIN7A	O14910	233 aa	Predicted RBP	11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	HR	O43593	1189 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	ZBTB14	O43829	449 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	SLCO2B1	O94956	709 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	WNT1	P04628	370 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	SP9	P0CG40	484 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	CHN1	P15882	459 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	TFEB	P19484	476 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	MAOB	P27338	520 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	CD38	P28907	300 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	ETV4	P43268	484 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	GNPDA1	P46926	289 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	PREP	P48147	710 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	GLRB	P48167	497 aa		11.19	□□□□□ -0.62
MCF2L-231	ENST00000494043	SRP54	P61011	504 aa	Known RBP	11.19	□□□□□ -0.62

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