RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 MTHFD1P11586 935 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 LPOP22079 712 aaPredicted RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 HMGCLP35914 325 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 SPAM1P38567 509 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 PBX1P40424 430 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 ARCN1P48444 511 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 DYNLT1P63172 113 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 TUBB4BP68371 445 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 MRPL49Q13405 166 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 XRCC4Q13426 336 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 TUBB2AQ13885 445 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 MESDQ14696 234 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 INPP5JQ15735 1006 aaPredicted RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 PPP2R5EQ16537 467 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 TMTC4Q5T4D3 741 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 IZUMO3Q5VZ72 239 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 PAPD7Q5XG87 772 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 ARMC6Q6NXE6 501 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 JMJD6Q6NYC1 403 aaPredicted RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 DUS1LQ6P1R4 473 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 FBXO38Q6PIJ6 1188 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 TMEM220Q6QAJ8 160 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 FAM151BQ6UXP7 276 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 H2AFVQ71UI9 128 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 OOSP2Q86WS3 158 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 RFX6Q8HWS3 928 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 SLC38A9Q8NBW4 561 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 CTNNBL1Q8WYA6 563 aaPredicted RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 ZNF501Q96CX3 271 aaPredicted RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 OLFM3Q96PB7 478 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 TUBB2BQ9BVA1 445 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 MAK16Q9BXY0 300 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 ZCCHC2Q9C0B9 1178 aaKnown RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 CHST8Q9H2A9 424 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 CUEDC1Q9NWM3 386 aaPredicted RBP12.04□□□□□ -0.48
SAMM50-205ENST00000493621 SOHLH2Q9NX45 425 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 SNX7Q9UNH6 387 aa12.04□□□□□ -0.48
SAMM50-205ENST00000493621 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 A6NL46 340 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 ZNF487B1APH4 448 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 TCP11X1B4DZS4 312 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 ZNF185O15231 689 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 DDX3YO15523 660 aaKnown RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 DPM1O60762 260 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 CEACAM4O75871 244 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 TMEM63AO94886 807 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 KLK3P07288 261 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 PTPN3P26045 913 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 CA5AP35218 305 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 FANCCQ00597 558 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 IQCB1Q15051 598 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 TEX44Q53QW1 395 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 GPRC6AQ5T6X5 926 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 PRAMEF17Q5VTA0 474 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 FAM69BQ5VUD6 431 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 LCN10Q6JVE6 187 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 ZNF517Q6ZMY9 492 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 SLC25A41Q8N5S1 370 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 ENDOVQ8N8Q3 282 aaKnown RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 Q8NA96 180 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 DDHD1Q8NEL9 900 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 FDCSPQ8NFU4 85 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 OR8K5Q8NH50 307 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 ADAMTS17Q8TE56 1095 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 C12orf66Q96MD2 445 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 PPM1MQ96MI6 270 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 INSM2Q96T92 566 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 WWP1Q9H0M0 922 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 TRABDQ9H4I3 376 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 SLAMF7Q9NQ25 335 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 PCDHGB7Q9Y5F8 929 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 DNMT3AQ9Y6K1 912 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-205ENST00000493621 CELSR2Q9HCU4 2923 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 CCDC88CQ9P219 2028 aa12.03□□□□□ -0.48
SAMM50-205ENST00000493621 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.48
SAMM50-205ENST00000493621 GLYATL1P3A0A0U1RQE8 302 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 F5H423 210 aaPredicted RBP12.02□□□□□ -0.49
SAMM50-205ENST00000493621 MEN1O00255 615 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 BUD23O43709 281 aaKnown RBP12.02□□□□□ -0.49
SAMM50-205ENST00000493621 KRT1P04264 644 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 ZFXP17010 805 aaPredicted RBP12.02□□□□□ -0.49
SAMM50-205ENST00000493621 NFKB1P19838 968 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 AKT1P31749 480 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 CD68P34810 354 aaPredicted RBP12.02□□□□□ -0.49
SAMM50-205ENST00000493621 CHRNA4P43681 627 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
SAMM50-205ENST00000493621 WNT3AP56704 352 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 UBASH3AP57075 661 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 GSDMDP57764 484 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 SIRPB2Q5JXA9 342 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 PLEKHS1Q5SXH7 462 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 FNBP1LQ5T0N5 605 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 ZDHHC20Q5W0Z9 365 aa12.02□□□□□ -0.49
SAMM50-205ENST00000493621 METRNLQ641Q3 311 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms