RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 LRRC8CQ8TDW0 803 aa13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 LINGO1Q96FE5 620 aa13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 RMDN2Q96LZ7 410 aa13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 MECRQ9BV79 373 aa13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 MBNL1Q9NR56 388 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 KLHL42Q9P2K6 505 aa13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
PDZRN3-210ENST00000492909 KPNA5O15131 536 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 SLC31A1O15431 190 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 SGTAO43765 313 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ZBTB14O43829 449 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 VEGFDO43915 354 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ZNF217O75362 1048 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 SEMA4FO95754 770 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TSPAN12O95859 305 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 DGKAP23743 735 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TRIM23P36406 574 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 PRLHRP49683 370 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 CDK3Q00526 305 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 GTF2H3Q13889 308 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 INPP5AQ14642 412 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ADGRG6Q86SQ4 1221 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ISCA2Q86U28 154 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TRIM42Q8IWZ5 723 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 FBXL6Q8N531 539 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TMEM105Q8N8V8 129 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 EEF1AKMT1Q8WVE0 214 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 COX14Q96I36 57 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TEX101Q9BY14 249 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 OR2AG1Q9H205 316 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ALG9Q9H6U8 611 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 WDR26Q9H7D7 661 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 SIRPGQ9P1W8 387 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 CYP8B1Q9UNU6 501 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TARM1B6A8C7 271 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 G3V2L1 256 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 APBB3O95704 486 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 SBK3P0C264 359 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 MYL2P10916 166 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 AOC1P19801 751 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 AOAHP28039 575 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 OXTRP30559 389 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ALDH3A1P30838 453 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 CCR7P32248 378 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 CTSCP53634 463 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TMEM220Q6QAJ8 160 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 FAM47EQ6ZV65 393 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ZNF75CPQ92670 426 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 PTERQ96BW5 349 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 PDLIM5Q96HC4 596 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ZNF514Q96K75 400 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 TFB2MQ9H5Q4 396 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 MANSC1Q9H8J5 431 aa13.86□□□□□ -0.19
PDZRN3-210ENST00000492909 ANKRD12Q6UB98 2062 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 RAD51BO15315 384 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 EDF1O60869 148 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 GPR37L1O60883 481 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 CBSLP0DN79 551 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 BGNP21810 368 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 CBSP35520 551 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 KCNJ2P63252 427 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 MTAPQ13126 283 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 BCL7AQ4VC05 210 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 ZYG11AQ6WRX3 759 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 ASRGL1Q7L266 308 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 BMP8AQ7Z5Y6 402 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 C10orf107Q8IVU9 208 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 DENND6BQ8NEG7 585 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 RHEBL1Q8TAI7 183 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 RAB3IL1Q8TBN0 382 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 KIAA1191Q96A73 305 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 TOE1Q96GM8 510 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 LGR4Q9BXB1 951 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 PHPT1Q9NRX4 125 aaPredicted RBP13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 DLGAP2Q9P1A6 1054 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 ATXN10Q9UBB4 475 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 USH1CQ9Y6N9 552 aa13.85□□□□□ -0.19
PDZRN3-210ENST00000492909 ZDBF2Q9HCK1 2354 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 CCDC189A1A4V9 331 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 EIF3FO00303 357 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 BTN3A1O00481 513 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 KLF11O14901 512 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 CD6P30203 668 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 IGFALSP35858 605 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 BOP1Q14137 746 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 CHI3L2Q15782 390 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 ACSBG2Q5FVE4 666 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 PLEKHS1Q5SXH7 462 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 ATG16L1Q676U5 607 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 NAPRTQ6XQN6 538 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 TRAPPC5Q8IUR0 188 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 MYO1HQ8N1T3 1032 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 CAMKK1Q8N5S9 505 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 PPP1R14CQ8TAE6 165 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 STAG3L4Q8TBR4 150 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 ELMO1Q92556 727 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 CCM2Q9BSQ5 444 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms