RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 TRIM4Q9C037 500 aa16.9■□□□□ 0.3
SGMS1-204ENST00000492601 TRIT1Q9H3H1 467 aaKnown RBP16.9■□□□□ 0.3
SGMS1-204ENST00000492601 IMP3Q9NV31 184 aaKnown RBP16.9■□□□□ 0.3
SGMS1-204ENST00000492601 SMOXQ9NWM0 555 aa16.9■□□□□ 0.3
SGMS1-204ENST00000492601 GEMIN8Q9NWZ8 242 aaKnown RBP16.9■□□□□ 0.3
SGMS1-204ENST00000492601 EFR3BQ9Y2G0 817 aa16.9■□□□□ 0.3
SGMS1-204ENST00000492601 AAR2Q9Y312 384 aaKnown RBP16.9■□□□□ 0.3
SGMS1-204ENST00000492601 CFAP20Q9Y6A4 193 aaKnown RBP16.9■□□□□ 0.3
SGMS1-204ENST00000492601 DNMT3AQ9Y6K1 912 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-204ENST00000492601 GRID2IPA4D2P6 1211 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 SRP72O76094 671 aaKnown RBP16.89■□□□□ 0.29
SGMS1-204ENST00000492601 SFTPCP11686 197 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 FECHP22830 423 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 POLE2P56282 527 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 TMPRSS15P98073 1019 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 PLCL1Q15111 1095 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 DUS1LQ6P1R4 473 aaKnown RBP16.89■□□□□ 0.29
SGMS1-204ENST00000492601 RASGRP3Q8IV61 690 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 LRRC57Q8N9N7 239 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 GALNT6Q8NCL4 622 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 OR13C4Q8NGS5 318 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 CALR3Q96L12 384 aaKnown RBP16.89■□□□□ 0.29
SGMS1-204ENST00000492601 SPATA13Q96N96 652 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 TBL1YQ9BQ87 522 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 WWP1Q9H0M0 922 aa16.89■□□□□ 0.29
SGMS1-204ENST00000492601 MRPS18BQ9Y676 258 aaKnown RBP16.89■□□□□ 0.29
SGMS1-204ENST00000492601 SEC16AO15027 2179 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 BTNL10A8MVZ5 291 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 CCL22O00626 93 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 KIAA0754O94854 1291 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 TJP3O95049 919 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 MTHFD1P11586 935 aaKnown RBP16.88■□□□□ 0.29
SGMS1-204ENST00000492601 CETN2P41208 172 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 STAT5AP42229 794 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 CCR10P46092 362 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 VAV2P52735 878 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 CDC20Q12834 499 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 METRNLQ641Q3 311 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 C6orf15Q6UXA7 325 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-204ENST00000492601 KIAA1328Q86T90 577 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 ESX1Q8N693 406 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 KLHL6Q8WZ60 621 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 STARD8Q92502 1023 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 ZNF514Q96K75 400 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-204ENST00000492601 INSM2Q96T92 566 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-204ENST00000492601 EFHD1Q9BUP0 239 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 SLC25A18Q9H1K4 315 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 FAM96AQ9H5X1 160 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 EPHA6Q9UF33 1036 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 LNPEPQ9UIQ6 1025 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 CRLS1Q9UJA2 301 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 RPS6KL1Q9Y6S9 549 aa16.88■□□□□ 0.29
SGMS1-204ENST00000492601 IGHV5-51A0A0C4DH38 117 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 MGAT4DA6NG13 374 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 CRTAMO95727 393 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 PTMAP06454 111 aaKnown RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 NELFEP18615 380 aaKnown RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 OAS2P29728 719 aaKnown RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 XIAPP98170 497 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 KCNAB2Q13303 367 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 MAP7Q14244 749 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 IL11RAQ14626 422 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 KCNAB1Q14722 419 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 DEFB109BQ30KR1 87 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 DENND5AQ6IQ26 1287 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 C16orf46Q6P387 395 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 MICALCLQ6ZW33 695 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 SPDYE1Q8NFV5 336 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 STAMBPL1Q96FJ0 436 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 DCUN1D1Q96GG9 259 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 C12orf66Q96MD2 445 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 CATSPER2Q96P56 530 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 RAB33BQ9H082 229 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 ADNPQ9H2P0 1102 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 AMFRQ9UKV5 643 aa16.87■□□□□ 0.29
SGMS1-204ENST00000492601 PACSIN2Q9UNF0 486 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 SNRNP200O75643 2136 aaKnown RBP16.87■□□□□ 0.29
SGMS1-204ENST00000492601 SPAG6O75602 509 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 POLBP06746 335 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 FGF5P12034 268 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 TCN2P20062 427 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 F8A1P23610 371 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 DLSTP36957 453 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 ZNF140P52738 457 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-204ENST00000492601 BCL7AQ4VC05 210 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 KLHL35Q6PF15 583 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 CERS6Q6ZMG9 384 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 ARHGEF18Q6ZSZ5 1173 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 PEX26Q7Z412 305 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 PTRH1Q86Y79 214 aaKnown RBP16.86■□□□□ 0.29
SGMS1-204ENST00000492601 LILRA3Q8N6C8 439 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-204ENST00000492601 OR2L2Q8NH16 312 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 MAP3K3Q99759 626 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 CROTQ9UKG9 612 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 ACSL5Q9ULC5 683 aa16.86■□□□□ 0.29
SGMS1-204ENST00000492601 MED13Q9UHV7 2174 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 A0A0U1RQJ8 604 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms