RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	DRG2	P55039	364 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	OR1D5	P58170	312 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	UBE2I	P63279	158 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	CKAP4	Q07065	602 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	CYP4F3	Q08477	520 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	SQSTM1	Q13501	440 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	NFE2L1	Q14494	772 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	MORF4L2	Q15014	288 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	SEPT7	Q16181	437 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	MRNIP	Q6NTE8	343 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	PIM3	Q86V86	326 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	CFAP206	Q8IYR0	622 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	CLDN19	Q8N6F1	224 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	OR10G6	Q8NH81	332 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	CXorf40B	Q96DE9	158 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	NXPE2	Q96DL1	559 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	MFSD3	Q96ES6	412 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	TMEM74	Q96NL1	305 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	TSSK1B	Q9BXA7	367 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	NRSN2	Q9GZP1	204 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	EPB41L1	Q9H4G0	881 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	POT1	Q9NUX5	634 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	RAX	Q9Y2V3	346 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	APC2	O95996	2303 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	LAMA5	O15230	3695 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	UNC13C	Q8NB66	2214 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	IGHV1OR21-1	A0A087WYE8	117 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	FAM187A	A6NFU0	413 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	CASC3	O15234	703 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	SLC35G4	P0C7Q5	338 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	BRAF	P15056	766 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	IVD	P26440	423 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	SLC19A1	P41440	591 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	RPA4	Q13156	261 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	AMZ1	Q400G9	498 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	MAP9	Q49MG5	647 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	ANKRD20A4	Q4UJ75	823 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	DNAJC21	Q5F1R6	531 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	C19orf48	Q6RUI8	117 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	TMEM135	Q86UB9	458 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	BBOF1	Q8ND07	529 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	CCDC97	Q96F63	343 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	SNF8	Q96H20	258 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	AHCYL2	Q96HN2	611 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	TCF12	Q99081	682 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	NAT9	Q9BTE0	207 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	STRADB	Q9C0K7	418 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	MAD1L1	Q9Y6D9	718 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	PIKFYVE	Q9Y2I7	2098 aa		13.54	□□□□□ -0.24
PTPN7-215	ENST00000492451	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	LILRA5	A6NI73	299 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	EFCAB8	A8MWE9	144 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	DUX1	O43812	170 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	NDUFS3	O75489	264 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	URI1	O94763	535 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	POLB	P06746	335 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	CD1C	P29017	333 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	CCKBR	P32239	447 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	PPM1F	P49593	454 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	INHBC	P55103	352 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	PLOD1	Q02809	727 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	TUBB2A	Q13885	445 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	CLCA4	Q14CN2	919 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	RTP5	Q14D33	572 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	RNF187	Q5TA31	235 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	CES3	Q6UWW8	571 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	MICALCL	Q6ZW33	695 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	LRRC6	Q86X45	466 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	PDIK1L	Q8N165	341 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	OTUD6B	Q8N6M0	293 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	GPR150	Q8NGU9	434 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	NAT14	Q8WUY8	206 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZFPM2	Q8WW38	1151 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZNF669	Q96BR6	464 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	STAMBPL1	Q96FJ0	436 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	SIGLEC10	Q96LC7	697 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	TRIM51	Q9BSJ1	452 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	TUBB2B	Q9BVA1	445 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	WWP1	Q9H0M0	922 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	SLC40A1	Q9NP59	571 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	FAM8A1	Q9UBU6	413 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	CDC23	Q9UJX2	597 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	PSMD13	Q9UNM6	376 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	WDR37	Q9Y2I8	494 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	ENTPD2	Q9Y5L3	495 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	HEBP2	Q9Y5Z4	205 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	RPS6KL1	Q9Y6S9	549 aa		13.53	□□□□□ -0.24
PTPN7-215	ENST00000492451	OR52A4P	A6NMU1	304 aa		13.52	□□□□□ -0.25
PTPN7-215	ENST00000492451	PRMT5	O14744	637 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN7-215	ENST00000492451	LIN7A	O14910	233 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN7-215	ENST00000492451	OR1I1	O60431	355 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms