RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 METRNLQ641Q3 311 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 KDELC1Q6UW63 502 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 SYVN1Q86TM6 617 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 HPS6Q86YV9 775 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 TRAPPC5Q8IUR0 188 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 D2HGDHQ8N465 521 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 TTC30BQ8N4P2 665 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 FAM26EQ8N5C1 309 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 TEX19Q8NA77 164 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 SIDT2Q8NBJ9 832 aaKnown RBP8.94□□□□□ -0.98
HDAC3-212ENST00000492407 GALNT6Q8NCL4 622 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 SPATA22Q8NHS9 363 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 GDAP1Q8TB36 358 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 RSC1A1Q92681 617 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 MIB2Q96AX9 1013 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 CCDC42Q96M95 316 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 TWSG1Q9GZX9 223 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 SYTL2Q9HCH5 934 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 ARFGAP3Q9NP61 516 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 LATS2Q9NRM7 1088 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 DNAJC16Q9Y2G8 782 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 PKP3Q9Y446 797 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 PCDHGB7Q9Y5F8 929 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 SPO11Q9Y5K1 396 aa8.94□□□□□ -0.98
HDAC3-212ENST00000492407 GLYATL1P3A0A0U1RQE8 302 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PIPSLA2A3N6 862 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 OR5K3A6NET4 321 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 MGAT4DA6NG13 374 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TLCD2A6NGC4 264 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 MATN2O00339 956 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 AURKAO14965 403 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PSTPIP1O43586 416 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 MTX2O75431 263 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PMPCBO75439 489 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 KATNA1O75449 491 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 ZNF189O75820 626 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 ZBTB11O95625 1053 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 KRT1P04264 644 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 MSL3P1P0C860 447 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 NDUFS1P28331 727 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PTPN4P29074 926 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 CD68P34810 354 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 CDKN2BP42772 138 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 DRG2P55039 364 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 RPS15P62841 145 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TUBB4BP68371 445 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 WASHC5Q12768 1159 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 XRCC4Q13426 336 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TUBB3Q13509 450 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 SEMA5AQ13591 1074 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TUBB2AQ13885 445 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 ERV3-1Q14264 604 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 SLC1A5Q15758 541 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 SEPT7Q16181 437 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 UGT8Q16880 541 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PLA2G4EQ3MJ16 856 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 KHDC1Q4VXA5 237 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TFDP3Q5H9I0 405 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TMTC4Q5T4D3 741 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 IZUMO3Q5VZ72 239 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PAPD7Q5XG87 772 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 IRGCQ6NXR0 463 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 ZNF517Q6ZMY9 492 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 FAM92BQ6ZTR7 304 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 ASB18Q6ZVZ8 466 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 CCDC91Q7Z6B0 441 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 IQCF2Q8IXL9 164 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 RCOR2Q8IZ40 523 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 RASGEF1AQ8N9B8 481 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 HEXDCQ8WVB3 486 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 P3H4Q92791 437 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 LINC00615Q96LM1 132 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PPP1R2P1Q96PQ5 205 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TACO1Q9BSH4 297 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 CCM2Q9BSQ5 444 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TUBB2BQ9BVA1 445 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 CEP41Q9BYV8 373 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 NHEJ1Q9H9Q4 299 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 MLXIPLQ9NP71 852 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 KLHL42Q9P2K6 505 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 LNPEPQ9UIQ6 1025 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 TP53TG5Q9Y2B4 290 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 WDR37Q9Y2I8 494 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 PCDHGA9Q9Y5G4 932 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 MRPS18BQ9Y676 258 aaKnown RBP8.93□□□□□ -0.98
HDAC3-212ENST00000492407 COLEC10Q9Y6Z7 277 aa8.93□□□□□ -0.98
HDAC3-212ENST00000492407 IGHV5-51A0A0C4DH38 117 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 CDC14CA4D256 554 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 C5orf60A6NFR6 353 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 C2orf81A6NN90 581 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 CYSRT1A8MQ03 144 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 AGAP14A8MT82 685 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 CST8O60676 142 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 CPNE3O75131 537 aaKnown RBP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ANXA9O76027 345 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 RAB40ALP0C0E4 278 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms