RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TMEM126BQ8IUX1 230 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 SRRM1Q8IYB3 904 aaKnown RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 RASGEF1AQ8N9B8 481 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 ANKRD20A12PQ8NF67 263 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 HDAC11Q96DB2 347 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 IMP4Q96G21 291 aaKnown RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 LRFN5Q96NI6 719 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 VPS35Q96QK1 796 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 ADGRE3Q9BY15 652 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 NLNQ9BYT8 704 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 BPIFA1Q9NP55 256 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 KCND1Q9NSA2 647 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 NTNG1Q9Y2I2 539 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 CFAP20Q9Y6A4 193 aaKnown RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 MEN1O00255 615 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 CYP1A2P05177 515 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 RAB40ALP0C0E4 278 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 GJC1P36383 396 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.34
USF1-206ENST00000491629 VAV2P52735 878 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.34
USF1-206ENST00000491629 ATP1A4Q13733 1029 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 NFE2L1Q14494 772 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 NOMO1Q15155 1222 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 DUS1LQ6P1R4 473 aaKnown RBP12.9□□□□□ -0.34
USF1-206ENST00000491629 TMEM151BQ8IW70 566 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 RHOT1Q8IXI2 618 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 CISD2Q8N5K1 135 aaKnown RBP12.9□□□□□ -0.34
USF1-206ENST00000491629 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 SPATA22Q8NHS9 363 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 NAT14Q8WUY8 206 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 INSM2Q96T92 566 aaPredicted RBP12.9□□□□□ -0.34
USF1-206ENST00000491629 BARD1Q99728 777 aaKnown RBP12.9□□□□□ -0.34
USF1-206ENST00000491629 NRTNQ99748 197 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 ZNF670Q9BS34 389 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 TLR10Q9BXR5 811 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 SLC29A3Q9BZD2 475 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 GPR63Q9BZJ6 419 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 HRASLS2Q9NWW9 162 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 IP6K2Q9UHH9 426 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 SNX7Q9UNH6 387 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 SLC5A6Q9Y289 635 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 BTRCQ9Y297 605 aa12.9□□□□□ -0.34
USF1-206ENST00000491629 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.35
USF1-206ENST00000491629 PCNX1Q96RV3 2341 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 UBA6A0AVT1 1052 aaPredicted RBP12.89□□□□□ -0.35
USF1-206ENST00000491629 MASP2O00187 686 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 GAPDHSO14556 408 aaPredicted RBP12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A9O60656 530 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 POP7O75817 140 aaKnown RBP12.89□□□□□ -0.35
USF1-206ENST00000491629 MT-CYBP00156 380 aaPredicted RBP12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A6P19224 532 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A1P22309 533 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A4P22310 534 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 PDE1BQ01064 536 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 PCSK7Q16549 785 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 B4GALNT4Q76KP1 1039 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 TTC30BQ8N4P2 665 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 CCNYQ8ND76 341 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
USF1-206ENST00000491629 OR1L3Q8NH93 324 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 CD180Q99467 661 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A7Q9HAW7 530 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A10Q9HAW8 530 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 UGT1A8Q9HAW9 530 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 ZBTB20Q9HC78 741 aaPredicted RBP12.89□□□□□ -0.35
USF1-206ENST00000491629 IL26Q9NPH9 171 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 LATS2Q9NRM7 1088 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 PCMTD2Q9NV79 361 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 GPR83Q9NYM4 423 aa12.89□□□□□ -0.35
USF1-206ENST00000491629 OR6C74A6NCV1 312 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 ZBTB11O95625 1053 aaPredicted RBP12.88□□□□□ -0.35
USF1-206ENST00000491629 MTHFD1P11586 935 aaKnown RBP12.88□□□□□ -0.35
USF1-206ENST00000491629 HALP42357 657 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 GSDMDP57764 484 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 CDK18Q07002 472 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 PTCHD3Q3KNS1 767 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 ZRANB3Q5FWF4 1079 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 METRNLQ641Q3 311 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 ZNF385CQ66K41 422 aaPredicted RBP12.88□□□□□ -0.35
USF1-206ENST00000491629 SPOCD1Q6ZMY3 1216 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 MED25Q71SY5 747 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 AMZ2Q86W34 360 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 HPS6Q86YV9 775 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 BEND7Q8N7W2 519 aaPredicted RBP12.88□□□□□ -0.35
USF1-206ENST00000491629 TMEM102Q8N9M5 508 aaPredicted RBP12.88□□□□□ -0.35
USF1-206ENST00000491629 KCTD6Q8NC69 237 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 OR8K5Q8NH50 307 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 C5orf34Q96MH7 638 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 SLC24A2Q9UI40 661 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
USF1-206ENST00000491629 ITPR3Q14573 2671 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 A0A087X0T9 212 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 ANKUB1A6NFN9 424 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms