RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BLOC1S5Q8TDH9 187 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 EID2BQ96D98 161 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 MAELQ96JY0 434 aaKnown RBP22.47■■□□□ 1.19
USF3-203ENST00000491165 OMDQ99983 421 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 ADGRE3Q9BY15 652 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 VCX3AQ9NNX9 186 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 CD93Q9NPY3 652 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 SERGEFQ9UGK8 458 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 MRPS17Q9Y2R5 130 aaKnown RBP22.47■■□□□ 1.19
USF3-203ENST00000491165 SCN8AQ9UQD0 1980 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 A0A0J9YYE9 177 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 C16orf96A6NNT2 1141 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 TMEM233B4DJY2 109 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 BCAS2O75934 225 aaPredicted RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 TRBC1P01850 177 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 DRD3P35462 400 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 MSX2P35548 267 aaPredicted RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 CD151P48509 253 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 MS4A2Q01362 244 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 AADATQ8N5Z0 425 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 C2CD4AQ8NCU7 369 aaPredicted RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 SLC2A6Q9UGQ3 507 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 ARL5AQ9Y689 179 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 COMMD3-BMI1R4GMX3 469 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 LRRK1Q38SD2 2015 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 SMIM31A0A1B0GVY4 71 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 TSPAN11A1L157 253 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 NPIPB15A6NHN6 443 aaPredicted RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 STK25O00506 426 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 MID1O15344 667 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 DNAJA2O60884 412 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 DCNP07585 359 aaKnown RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 PMLP29590 882 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 SLC12A2P55011 1212 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 TAS2R39P59534 338 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 DNAJB13P59910 316 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 PTPRCAPQ14761 206 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 ZNF470Q6ECI4 717 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 RNF148Q8N7C7 305 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 ADCY4Q8NFM4 1077 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 OR2T3Q8NH03 318 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 CEP70Q8NHQ1 597 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 UNKQ9C0B0 810 aaKnown RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 COPS7BQ9H9Q2 264 aaPredicted RBP22.46■■□□□ 1.19
USF3-203ENST00000491165 KCTD3Q9Y597 815 aa22.46■■□□□ 1.19
USF3-203ENST00000491165 SDHDO14521 159 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 SPINT1O43278 529 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 TIMP2P16035 220 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 ATP5F1P24539 256 aaPredicted RBP22.45■■□□□ 1.18
USF3-203ENST00000491165 HNF1BP35680 557 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 RPS14P62263 151 aaKnown RBP22.45■■□□□ 1.18
USF3-203ENST00000491165 POU4F1Q01851 419 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 STARD3Q14849 445 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 CST6Q15828 149 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 TSPAN33Q86UF1 283 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 PAF1Q8N7H5 531 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 NAT14Q8WUY8 206 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 HEXDCQ8WVB3 486 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 NPAS2Q99743 824 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 NDUFA13Q9P0J0 144 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 DOCK9Q9BZ29 2069 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 STX16-NPEPL1H3BU86 382 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 KIAA0930Q6ICG6 404 aaPredicted RBP22.45■■□□□ 1.18
USF3-203ENST00000491165 BRAT1Q6PJG6 821 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 EDAQ92838 391 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 SGF29Q96ES7 293 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 TREX1Q9NSU2 369 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 ITM2BQ9Y287 266 aa22.45■■□□□ 1.18
USF3-203ENST00000491165 LDB2O43679 373 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 PI15O43692 258 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 CRTAMO95727 393 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 LHCGRP22888 699 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 ITGB7P26010 798 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 SIGLEC14Q08ET2 396 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 LRRC32Q14392 662 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 CDKN3Q16667 212 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 EOGTQ5NDL2 527 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 SATL1Q86VE3 508 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 TICAM1Q8IUC6 712 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 SYNPOQ8N3V7 929 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 MRGPRX1Q96LB2 322 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 MRPL1Q9BYD6 325 aaKnown RBP22.44■■□□□ 1.18
USF3-203ENST00000491165 EPB41L1Q9H4G0 881 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 MRGBPQ9NV56 204 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 UTP6Q9NYH9 597 aaKnown RBP22.44■■□□□ 1.18
USF3-203ENST00000491165 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.44■■□□□ 1.18
USF3-203ENST00000491165 DKK3Q9UBP4 350 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 FBXO5Q9UKT4 447 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 PPIL1Q9Y3C6 166 aa22.44■■□□□ 1.18
USF3-203ENST00000491165 PRSS51A0A1B0GVH4 220 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 CHURC1-FNTBB4DL54 471 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 SMIM18P0DKX4 95 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 NDUFV2P19404 249 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 CNTN1Q12860 1018 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 PTK2BQ14289 1009 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 LILRA2Q8N149 483 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 PELI3Q8N2H9 469 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 SCRN2Q96FV2 425 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 FAR2Q96K12 515 aa22.43■■□□□ 1.18
USF3-203ENST00000491165 MCCC1Q96RQ3 725 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms