RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 HID1Q8IV36 788 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 ZBTB2Q8N680 514 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CABS1Q96KC9 395 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 SYTL2Q9HCH5 934 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 DNAJC28Q9NX36 388 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 PNMA8BQ9ULN7 279 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 H3BM21 787 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 EIF3FO00303 357 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-230ENST00000491028 TPP1O14773 563 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 OPA1O60313 960 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 MT-ND3P03897 115 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 MPOP05164 745 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 APOA4P06727 396 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 ACP5P13686 325 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 TYK2P29597 1187 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 PBLDP30039 288 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-230ENST00000491028 MPLP40238 635 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 CLCNKAP51800 687 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 PLA2G4EQ3MJ16 856 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SYTL3Q4VX76 610 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 TAF1BQ53T94 588 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SLC23A3Q6PIS1 610 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 RAPH1Q70E73 1250 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 RD3Q7Z3Z2 195 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 CMC1Q7Z7K0 106 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 PIM3Q86V86 326 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 CEP97Q8IW35 865 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 CYP4X1Q8N118 509 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SIDT2Q8NBJ9 832 aaKnown RBP18.3■□□□□ 0.52
MCF2L-230ENST00000491028 GIMAP7Q8NHV1 300 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 ACMSDQ8TDX5 336 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 ASZ1Q8WWH4 475 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 INPP5DQ92835 1189 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 GLMNQ92990 594 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SLC13A1Q9BZW2 595 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 ZDHHC5Q9C0B5 715 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 TMBIM4Q9HC24 238 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 CAPN10Q9HC96 672 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 GPAMQ9HCL2 828 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SARS2Q9NP81 518 aaKnown RBP18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SENP1Q9P0U3 644 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 APOBEC3BQ9UH17 382 aaKnown RBP18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SLC6A14Q9UN76 642 aa18.3■□□□□ 0.52
MCF2L-230ENST00000491028 SLC5A10A0PJK1 596 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 RFPL1O75677 317 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 CFIP05156 583 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 CBSLP0DN79 551 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 ZNF37AP17032 561 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-230ENST00000491028 JUNDP17535 347 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 CBSP35520 551 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 SLC26A3P40879 764 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 HNRNPKP61978 463 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■□□□□ 9
MCF2L-230ENST00000491028 ILF3Q12906 894 aaKnown RBP eCLIP18.29■□□□□ 0.52
MCF2L-230ENST00000491028 RPA4Q13156 261 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 BOP1Q14137 746 aaKnown RBP18.29■□□□□ 0.52
MCF2L-230ENST00000491028 GBX1Q14549 363 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 KIF19Q2TAC6 998 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 LRRC8EQ6NSJ5 796 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 IL27RAQ6UWB1 636 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 TRABD2AQ86V40 505 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 NKAPQ8N5F7 415 aaKnown RBP18.29■□□□□ 0.52
MCF2L-230ENST00000491028 GOLGA6L1Q8N7Z2 621 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 FAM136AQ96C01 138 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 SH3GL2Q99962 352 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 CENPHQ9H3R5 247 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 COG4Q9H9E3 785 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 TM7SF3Q9NS93 570 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 GALPQ9UBC7 116 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 GULP1Q9UBP9 304 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 SLC23A2Q9UGH3 650 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 TLK1Q9UKI8 766 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 SNX11Q9Y5W9 270 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 PCDH15Q96QU1 1955 aa18.29■□□□□ 0.52
MCF2L-230ENST00000491028 ZFC3H1O60293 1989 aaKnown RBP18.28■□□□□ 0.52
MCF2L-230ENST00000491028 A0A087X1B8 175 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 A0A096LPK6 155 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 PRR19A6NJB7 356 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 PHGDHO43175 533 aaKnown RBP18.28■□□□□ 0.52
MCF2L-230ENST00000491028 DFNA5O60443 496 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 GPC4O75487 556 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 WISP3O95389 354 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-230ENST00000491028 C2P06681 752 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 RETP07949 1114 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 SLC35E2BP0CK96 405 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 ENO3P13929 434 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-230ENST00000491028 CTSEP14091 401 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 DGKAP23743 735 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-230ENST00000491028 RGS4P49798 205 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 BNC1Q01954 994 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 GRIK2Q13002 908 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 ZNF460Q14592 562 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 ZNF423Q2M1K9 1284 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 TRIM61Q5EBN2 209 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 TNFAIP8L3Q5GJ75 292 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 GPBAR1Q8TDU6 330 aa18.28■□□□□ 0.52
MCF2L-230ENST00000491028 ATOH1Q92858 354 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-230ENST00000491028 TMEM159Q96B96 161 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms