RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	DMPK	Q09013	629 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	ITIH4	Q14624	930 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	BBS9	Q3SYG4	887 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	C3orf38	Q5JPI3	329 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	FOXR1	Q6PIV2	292 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	ABRAXAS1	Q6UWZ7	409 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	SLC9B2	Q86UD5	537 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	SPNS2	Q8IVW8	549 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	UNC5B	Q8IZJ1	945 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	KRT222	Q8N1A0	295 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	HM13	Q8TCT9	377 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	CXorf40B	Q96DE9	158 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	ZNF514	Q96K75	400 aa	Predicted RBP	18.2	■□□□□ 0.5
C4A-256	ENST00000490663	SEMA6C	Q9H3T2	930 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	SARS2	Q9NP81	518 aa	Known RBP	18.2	■□□□□ 0.5
C4A-256	ENST00000490663	IMP3	Q9NV31	184 aa	Known RBP	18.2	■□□□□ 0.5
C4A-256	ENST00000490663	SNX24	Q9Y343	169 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	FREM2	Q5SZK8	3169 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	DMXL2	Q8TDJ6	3036 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	KIR2DS5	A0A0G2JLQ3	304 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663		A0A0G2JNG1	304 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	SDR42E2	A6NKP2	422 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	IQCF5	A8MTL0	148 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	EFCAB8	A8MWE9	144 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	KIR2DS3	K7RE56	304 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	VIP	P01282	170 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	MPO	P05164	745 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	SLC2A4	P14672	509 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	PNLIP	P16233	465 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	CD1C	P29017	333 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	PDHA2	P29803	388 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	RPL21	P46778	160 aa	Known RBP	18.19	■□□□□ 0.5
C4A-256	ENST00000490663	CFHR1	Q03591	330 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	BOP1	Q14137	746 aa	Known RBP	18.19	■□□□□ 0.5
C4A-256	ENST00000490663	DHX34	Q14147	1143 aa	Known RBP	18.19	■□□□□ 0.5
C4A-256	ENST00000490663	KIR2DS5	Q14953	304 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	NR1D2	Q14995	579 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	RPE65	Q16518	533 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	ANKRD20A4	Q4UJ75	823 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	METRNL	Q641Q3	311 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	PACS1	Q6VY07	963 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	HEXDC	Q8WVB3	486 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	PEX13	Q92968	403 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	C12orf66	Q96MD2	445 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	RUNDC3B	Q96NL0	473 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	INSM2	Q96T92	566 aa	Predicted RBP	18.19	■□□□□ 0.5
C4A-256	ENST00000490663	CCM2	Q9BSQ5	444 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	COG4	Q9H9E3	785 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	ANAPC5	Q9UJX4	755 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	RPS6KL1	Q9Y6S9	549 aa		18.19	■□□□□ 0.5
C4A-256	ENST00000490663	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.19	■□□□□ 0.5
C4A-256	ENST00000490663	UBA6	A0AVT1	1052 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	HGF	P14210	728 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	HOXB3	P14651	431 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	TYRP1	P17643	537 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	HAL	P42357	657 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	NSG1	P42857	185 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	ARCN1	P48444	511 aa	Known RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	CYP4F3	Q08477	520 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	GPR18	Q14330	331 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	ZNF658B	Q4V348	819 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	ZNF789	Q5FWF6	425 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	PHF19	Q5T6S3	580 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	AGAP9	Q5VTM2	703 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	KIAA0930	Q6ICG6	404 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	ZNF574	Q6ZN55	896 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	IGDCC3	Q8IVU1	814 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	RCBTB1	Q8NDN9	531 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	ELMO1	Q92556	727 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	STAMBPL1	Q96FJ0	436 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	SNF8	Q96H20	258 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	LINC00615	Q96LM1	132 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	NRTN	Q99748	197 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	STN1	Q9H668	368 aa	Known RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	SATB2	Q9UPW6	733 aa		18.18	■□□□□ 0.5
C4A-256	ENST00000490663	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	18.18	■□□□□ 0.5
C4A-256	ENST00000490663	ZCWPW2	A0A1B0GU75	182 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	FAM237B	A0A1B0GVD1	139 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	OR5K4	A6NMS3	321 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	TP73	O15350	636 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	TCEA3	O75764	348 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	SEC31A	O94979	1220 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	SLC35G4	P0C7Q5	338 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	XRCC1	P18887	633 aa	Predicted RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	INHBC	P55103	352 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	EIF3B	P55884	814 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	GABRE	P78334	506 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	SNAP47	Q5SQN1	464 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	HIBCH	Q6NVY1	386 aa	Predicted RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	HOOK3	Q86VS8	718 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	ZCCHC14	Q8WYQ9	949 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	FAM136A	Q96C01	138 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	CFAP36	Q96G28	342 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	AHCYL2	Q96HN2	611 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	WDR83	Q9BRX9	315 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	OGFR	Q9NZT2	677 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	KLHL3	Q9UH77	587 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	TSR3	Q9UJK0	312 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	CDC23	Q9UJX2	597 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms