RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CEP112Q8N8E3 955 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 ZFPM2Q8WW38 1151 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 SEC14L1Q92503 715 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 ZNF669Q96BR6 464 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 DEPDC7Q96QD5 511 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PANX3Q96QZ0 392 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PRDM8Q9NQV8 689 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 MARCH4Q9P2E8 410 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CPNE7Q9UBL6 633 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 GNPTGQ9UJJ9 305 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 DNAJC16Q9Y2G8 782 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 MSRB2Q9Y3D2 182 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PCDHB1Q9Y5F3 818 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 HEBP2Q9Y5Z4 205 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PTPRBP23467 1997 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 D6RAR5 112 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 TMX2-CTNND1H3BSU7 103 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 KPNA5O15131 536 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 HYAL3O43820 417 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-212ENST00000489728 SNX2O60749 519 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 NDUFS3O75489 264 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 EML2O95834 649 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 ESR1P03372 595 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 PRSS56P0CW18 603 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 MYF5P13349 255 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 BRAFP15056 766 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 NDUFS1P28331 727 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
CPSF7-212ENST00000489728 ILF2Q12905 390 aaKnown RBP10.86□□□□□ -0.67
CPSF7-212ENST00000489728 THOC5Q13769 683 aaKnown RBP10.86□□□□□ -0.67
CPSF7-212ENST00000489728 SPIDRQ14159 915 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 NFE2L1Q14494 772 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 SEMA3AQ14563 771 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 KCTD19Q17RG1 926 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-212ENST00000489728 BBS9Q3SYG4 887 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 STEAP4Q687X5 459 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 RBM44Q6ZP01 1051 aaKnown RBP10.86□□□□□ -0.67
CPSF7-212ENST00000489728 KIAA0408Q6ZU52 694 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 CENPUQ71F23 418 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 GALNT7Q86SF2 657 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 TRIM48Q8IWZ4 208 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 CHCHD4Q8N4Q1 142 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 CLDN19Q8N6F1 224 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 OTUD6BQ8N6M0 293 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 PATE1Q8WXA2 126 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 LPGAT1Q92604 370 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 SCNM1Q9BWG6 230 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 CARD6Q9BX69 1037 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 TRIM31Q9BZY9 425 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 P2RY12Q9H244 342 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 LRRN3Q9H3W5 708 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 COG4Q9H9E3 785 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 GRHL1Q9NZI5 618 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 CLCA2Q9UQC9 943 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 SNX24Q9Y343 169 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 COMMD10Q9Y6G5 202 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 TEX264Q9Y6I9 313 aa10.86□□□□□ -0.67
CPSF7-212ENST00000489728 SPTBN2O15020 2390 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 COL27A1Q8IZC6 1860 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 NCOR2Q9Y618 2525 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 SPEGQ15772 3267 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 PPM1DO15297 605 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 OR1I1O60431 355 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 MT-CO3P00414 261 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 VIPP01282 170 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 RPLP0P05388 317 aaKnown RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 MTHFD1P11586 935 aaKnown RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 RPL10P27635 214 aaKnown RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 PBLDP30039 288 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 TMED2Q15363 201 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 MSS51Q4VC12 460 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CCDC157Q569K6 752 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 ZNF470Q6ECI4 717 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CES3Q6UWW8 571 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 XKR5Q6UX68 686 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CCNI2Q6ZMN8 369 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 FAM83HQ6ZRV2 1179 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 SFTPA2Q8IWL1 248 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CNTN4Q8IWV2 1026 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 OR10G6Q8NH81 332 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 ART4Q93070 314 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CXorf40BQ96DE9 158 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 TMEM74Q96NL1 305 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 FCRL3Q96P31 734 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 GFM1Q96RP9 751 aaKnown RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 SLC38A3Q99624 504 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 EPB41L5Q9HCM4 733 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 SLC40A1Q9NP59 571 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 C20orf96Q9NUD7 363 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 ZNF624Q9P2J8 865 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 ZC3H7BQ9UGR2 993 aaKnown RBP10.85□□□□□ -0.67
CPSF7-212ENST00000489728 RABGEF1Q9UJ41 708 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 PIKFYVEQ9Y2I7 2098 aa10.85□□□□□ -0.67
CPSF7-212ENST00000489728 IGHV1OR21-1A0A087WYE8 117 aa10.84□□□□□ -0.67
CPSF7-212ENST00000489728 A0A1W2PQM1 296 aa10.84□□□□□ -0.67
CPSF7-212ENST00000489728 SLC5A10A0PJK1 596 aa10.84□□□□□ -0.67
CPSF7-212ENST00000489728 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-212ENST00000489728 DUX1O43812 170 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms