RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TRAPPC5Q8IUR0 188 aa21.29■■□□□ 1
SMC4-221ENST00000489573 PJA1Q8NG27 643 aa21.29■■□□□ 1
SMC4-221ENST00000489573 FUBP1Q96AE4 644 aaKnown RBP21.29■■□□□ 1
SMC4-221ENST00000489573 C7orf26Q96N11 449 aa21.29■■□□□ 1
SMC4-221ENST00000489573 GATA5Q9BWX5 397 aaPredicted RBP21.29■■□□□ 1
SMC4-221ENST00000489573 CHRDQ9H2X0 955 aa21.29■■□□□ 1
SMC4-221ENST00000489573 THAP1Q9NVV9 213 aa21.29■■□□□ 1
SMC4-221ENST00000489573 TMEM114B3SHH9 223 aa21.28■■□□□ 1
SMC4-221ENST00000489573 UBXN8O00124 270 aa21.28■■□□□ 1
SMC4-221ENST00000489573 STK25O00506 426 aa21.28■■□□□ 1
SMC4-221ENST00000489573 NUAK1O60285 661 aa21.28■■□□□ 1
SMC4-221ENST00000489573 IPO13O94829 963 aaKnown RBP21.28■■□□□ 1
SMC4-221ENST00000489573 SEMA4FO95754 770 aa21.28■■□□□ 1
SMC4-221ENST00000489573 ZNF8P17098 575 aaPredicted RBP21.28■■□□□ 1
SMC4-221ENST00000489573 SLC1A6P48664 564 aa21.28■■□□□ 1
SMC4-221ENST00000489573 HSPA14Q0VDF9 509 aa21.28■■□□□ 1
SMC4-221ENST00000489573 GJD3Q8N144 294 aa21.28■■□□□ 1
SMC4-221ENST00000489573 DENND6BQ8NEG7 585 aa21.28■■□□□ 1
SMC4-221ENST00000489573 CLDN23Q96B33 292 aa21.28■■□□□ 1
SMC4-221ENST00000489573 ASB2Q96Q27 587 aa21.28■■□□□ 1
SMC4-221ENST00000489573 CYP4F12Q9HCS2 524 aa21.28■■□□□ 1
SMC4-221ENST00000489573 PHPT1Q9NRX4 125 aaPredicted RBP21.28■■□□□ 1
SMC4-221ENST00000489573 PIKFYVEQ9Y2I7 2098 aa21.28■■□□□ 1
SMC4-221ENST00000489573 SUPT3HB4E1H0 165 aa21.27■■□□□ 1
SMC4-221ENST00000489573 SLC31A1O15431 190 aa21.27■■□□□ 1
SMC4-221ENST00000489573 LILRB5O75023 590 aa21.27■■□□□ 1
SMC4-221ENST00000489573 SUPT3HO75486 399 aa21.27■■□□□ 1
SMC4-221ENST00000489573 ABCE1P61221 599 aaKnown RBP21.27■■□□□ 1
SMC4-221ENST00000489573 SYTL3Q4VX76 610 aa21.27■■□□□ 1
SMC4-221ENST00000489573 CGB2Q6NT52 195 aa21.27■■□□□ 1
SMC4-221ENST00000489573 DOK6Q6PKX4 331 aa21.27■■□□□ 1
SMC4-221ENST00000489573 CYHR1Q6ZMK1 362 aa21.27■■□□□ 1
SMC4-221ENST00000489573 ASZ1Q8WWH4 475 aa21.27■■□□□ 1
SMC4-221ENST00000489573 ELAC2Q9BQ52 826 aaKnown RBP21.27■■□□□ 1
SMC4-221ENST00000489573 LGR4Q9BXB1 951 aa21.27■■□□□ 1
SMC4-221ENST00000489573 FZD3Q9NPG1 666 aa21.27■■□□□ 1
SMC4-221ENST00000489573 NCKIPSDQ9NZQ3 722 aa21.27■■□□□ 1
SMC4-221ENST00000489573 TMCO1Q9UM00 188 aa21.27■■□□□ 1
SMC4-221ENST00000489573 CYP8B1Q9UNU6 501 aa21.27■■□□□ 1
SMC4-221ENST00000489573 GPR34Q9UPC5 381 aa21.27■■□□□ 1
SMC4-221ENST00000489573 TMEM98Q9Y2Y6 226 aa21.27■■□□□ 1
SMC4-221ENST00000489573 OR1A2Q9Y585 309 aa21.27■■□□□ 1
SMC4-221ENST00000489573 ITM2AO43736 263 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 GSTM1P09488 218 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 MPC1LP0DKB6 136 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 MYCLP1P12525 358 aaPredicted RBP21.27■□□□□ 0.99
SMC4-221ENST00000489573 MTHFD2P13995 350 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 OXTRP30559 389 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 NAGLUP54802 743 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 GSTM4Q03013 218 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 GKAP1Q5VSY0 366 aaPredicted RBP21.27■□□□□ 0.99
SMC4-221ENST00000489573 FRA10AC1Q70Z53 315 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 PIGWQ7Z7B1 504 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 GPSM1Q86YR5 675 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 SPEM1Q8N4L4 309 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 PHF21BQ96EK2 531 aa21.27■□□□□ 0.99
SMC4-221ENST00000489573 LINC00615Q96LM1 132 aaPredicted RBP21.27■□□□□ 0.99
SMC4-221ENST00000489573 FAM126AQ9BYI3 521 aaPredicted RBP21.27■□□□□ 0.99
SMC4-221ENST00000489573 ZNF395Q9H8N7 513 aaPredicted RBP21.27■□□□□ 0.99
SMC4-221ENST00000489573 NUMA1Q14980 2115 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 ZNF217O75362 1048 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 GPC4O75487 556 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 APBB3O95704 486 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 GFAPP14136 432 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 PBLDP30039 288 aaPredicted RBP21.26■□□□□ 0.99
SMC4-221ENST00000489573 RPS9P46781 194 aaKnown RBP21.26■□□□□ 0.99
SMC4-221ENST00000489573 CRTC3Q6UUV7 619 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 SBSNQ6UWP8 590 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 NEK10Q6ZWH5 1172 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 PTGR2Q8N8N7 351 aaPredicted RBP21.26■□□□□ 0.99
SMC4-221ENST00000489573 PPP4R1Q8TF05 950 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 FOXJ1Q92949 421 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 TMEM237Q96Q45 408 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 MYOCQ99972 504 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 C20orf27Q9GZN8 174 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 NUDT4Q9NZJ9 180 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 CDYLQ9Y232 598 aa21.26■□□□□ 0.99
SMC4-221ENST00000489573 TMEM202A6NGA9 273 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 C10orf142B7Z368 130 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 GPR89AB7ZAQ6 455 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 CHUKO15111 745 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 KLK8O60259 260 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 SNX3O60493 162 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 NPHS1O60500 1241 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 LYPLA1O75608 230 aaPredicted RBP21.25■□□□□ 0.99
SMC4-221ENST00000489573 SLCO2B1O94956 709 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 GPR89BP0CG08 455 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 OVGP1Q12889 678 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 RCN2Q14257 317 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 SPATA21Q7Z572 469 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 RAB44Q7Z6P3 723 aaPredicted RBP21.25■□□□□ 0.99
SMC4-221ENST00000489573 CRLF3Q8IUI8 442 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 VRK3Q8IV63 474 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 ZNF547Q8IVP9 402 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 FBXO39Q8N4B4 442 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 CCNYL1Q8N7R7 359 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 GLMNQ92990 594 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 TMEM159Q96B96 161 aa21.25■□□□□ 0.99
SMC4-221ENST00000489573 TOE1Q96GM8 510 aaKnown RBP21.25■□□□□ 0.99
SMC4-221ENST00000489573 DRC3Q9H069 523 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms