RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ZNF267Q14586 743 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ACCSLQ4AC99 568 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 TMEM215Q68D42 235 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 PPP4R4Q6NUP7 873 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 NLRP14Q86W24 1093 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 SFTPA1Q8IWL2 248 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ATP11CQ8NB49 1132 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 UBE2Q2Q8WVN8 375 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 SORCS1Q8WY21 1168 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 CCDC114Q96M63 670 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 CSPG4P5Q96PW8 444 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ALS2CR12Q96Q35 445 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 GABRG3Q99928 467 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF670Q9BS34 389 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 TUBB2BQ9BVA1 445 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRDM16Q9HAZ2 1276 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZDHHC4Q9NPG8 344 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 AMFRQ9UKV5 643 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 INTS6Q9UL03 887 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 GUCA1BQ9UMX6 200 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 UNC79Q9P2D8 2635 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 A0A0D9SEW6 157 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 EDDM13A0A1B0GTR0 161 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 CXorf51AA0A1B0GTR3 108 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 TCRBV21S2A2A0A5A6 115 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 TARSL2A2RTX5 802 aaKnown RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 VSTM5A8MXK1 200 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RASA4BC9J798 803 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 J3QKU1 62 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 DFFAO00273 331 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RASA4O43374 803 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 KDELR3O43731 214 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 C1QL1O75973 258 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 IPO13O94829 963 aaKnown RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZFXP17010 805 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 HOXA5P20719 270 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 KDELR1P24390 212 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 MSX2P35548 267 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 SLC6A9P48067 706 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 IRX4P78413 519 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 DPYSQ14117 519 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 DPYSL3Q14195 570 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAB39AQ14964 217 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 TXNRD3NBQ6F5E7 133 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 TCTN3Q6NUS6 607 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 CYP4V2Q6ZWL3 525 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF572Q7Z3I7 529 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 PEX26Q7Z412 305 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 VSIG1Q86XK7 387 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 CCDC50Q8IVM0 306 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RCOR2Q8IZ40 523 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 UMODL1-AS1Q8N2C9 162 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 UBL4BQ8N7F7 174 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 FAM71BQ8TC56 605 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 NSMCE1Q8WV22 266 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 HMGB4Q8WW32 186 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 CASKIN2Q8WXE0 1202 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ARHGEF2Q92974 986 aaKnown RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAB24Q969Q5 203 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RELTQ969Z4 430 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RGMAQ96B86 450 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 RBM41Q96IZ5 413 aaKnown RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ACOX2Q99424 681 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 CPPED1Q9BRF8 314 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ENKD1Q9H0I2 346 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 LZTFL1Q9NQ48 299 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 HAUS2Q9NVX0 235 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF212Q9UDV6 495 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 VPS51Q9UID3 782 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 NEU3Q9UQ49 428 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 HYOU1Q9Y4L1 999 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 OR51B4Q9Y5P0 310 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 KALRNO60229 2985 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 DOCK4Q8N1I0 1966 aa8.1□□□□□ -1.11
TRAPPC12-221ENST00000489032 ATG2BQ96BY7 2078 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ASXL3Q9C0F0 2248 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 GRID2IPA4D2P6 1211 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 MIF4GDA9UHW6 222 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF487B1APH4 448 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 PATE3B3GLJ2 98 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 WASH3PC4AMC7 463 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 APOL1O14791 398 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 SNAP91O60641 907 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 PALMO75781 387 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ACADMP11310 421 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 HLA-EP13747 358 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRKCHP24723 683 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ACVRL1P37023 503 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 NUMBP49757 651 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 STK19P49842 368 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ENPP2Q13822 863 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 TFDP2Q14188 446 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 DLG2Q15700 870 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ELAVL1Q15717 326 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ANKRD20A8PQ5CZ79 823 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms