RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ZBTB20Q9HC78 741 aaPredicted RBP3.38□□□□□ -1.87
RFC4-213ENST00000489028 ZNF69Q9UC07 566 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 FLT1P17948 1338 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 PCDH7O60245 1069 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 GPC4O75487 556 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 LDLRP01130 860 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 RB1P06400 928 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 CLTBP09497 229 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 IGHV4-38-2P0DP08 117 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 NMBRP28336 390 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 CHRNB4P30926 498 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 PRAMEP78395 509 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 IRF3Q14653 427 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 RALBP1Q15311 655 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 FCN2Q15485 313 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 DLG2Q15700 870 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 CCDC6Q16204 474 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 ZDHHC20Q5W0Z9 365 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 TMEM154Q6P9G4 183 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 C1orf122Q6ZSJ8 110 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 TICAM1Q8IUC6 712 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 SCYL3Q8IZE3 742 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 OLIG1Q8TAK6 271 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 SCFD2Q8WU76 684 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 TMEM190Q8WZ59 177 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 WBP2Q969T9 261 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 FTOQ9C0B1 505 aaKnown RBP eCLIP3.37□□□□□ -1.87
RFC4-213ENST00000489028 DNAJC18Q9H819 358 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 NENFQ9UMX5 172 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 LYVE1Q9Y5Y7 322 aa3.37□□□□□ -1.87
RFC4-213ENST00000489028 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.37□□□□□ -1.87
RFC4-213ENST00000489028 C15orf62A8K5M9 175 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 GNB3P16520 340 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 GNAZP19086 355 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 HOXA13P31271 388 aaPredicted RBP3.36□□□□□ -1.87
RFC4-213ENST00000489028 RGS19P49795 217 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 SUOXP51687 545 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 MFAP5Q13361 173 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 DENND5BQ6ZUT9 1274 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 RSRC2Q7L4I2 434 aaKnown RBP3.36□□□□□ -1.87
RFC4-213ENST00000489028 TTC39CQ8N584 583 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 PGAM5Q96HS1 289 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 DACH2Q96NX9 599 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 BARHL1Q9BZE3 327 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 ADPRHL2Q9NX46 363 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 MIOSQ9NXC5 875 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 KCNK7Q9Y2U2 307 aa3.36□□□□□ -1.87
RFC4-213ENST00000489028 A0A087X002 238 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 MAGEB17A8MXT2 336 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 CDRT15L2A8MXV6 281 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 PLOD2O00469 737 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 WDHD1O75717 1129 aaPredicted RBP3.35□□□□□ -1.87
RFC4-213ENST00000489028 BAIAP3O94812 1187 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 GH2P01242 217 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 ZNF883P0CG24 379 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 ACP2P11117 423 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 PRLRP16471 622 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 CKMT2P17540 419 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 CAPN3P20807 821 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 EPHA2P29317 976 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 MAP2K2P36507 400 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 CRYMQ14894 314 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 ALS2CLQ60I27 953 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 FAM109BQ6ICB4 259 aaPredicted RBP3.35□□□□□ -1.87
RFC4-213ENST00000489028 MFSD6Q6ZSS7 791 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 PLD3Q8IV08 490 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 ARID3BQ8IVW6 561 aaPredicted RBP3.35□□□□□ -1.87
RFC4-213ENST00000489028 TEX11Q8IYF3 940 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 L3MBTL4Q8NA19 623 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 PPHLN1Q8NEY8 458 aaKnown RBP3.35□□□□□ -1.87
RFC4-213ENST00000489028 OR2T12Q8NG77 320 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 TBC1D16Q8TBP0 767 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 SLC47A1Q96FL8 570 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 LRR1Q96L50 414 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 NCAPGQ9BPX3 1015 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 DENND2DQ9H6A0 471 aaPredicted RBP3.35□□□□□ -1.87
RFC4-213ENST00000489028 SIX2Q9NPC8 291 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 C2CD2Q9Y426 696 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 PCDHGA5Q9Y5G8 931 aa3.35□□□□□ -1.87
RFC4-213ENST00000489028 A6NL46 340 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 HHLA1C9JL84 531 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 GPR137BO60478 399 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 RSL1D1O76021 490 aaKnown RBP3.34□□□□□ -1.87
RFC4-213ENST00000489028 SERPINB2P05120 415 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 MMP9P14780 707 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 LIFP15018 202 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 ERVK11-1P61568 191 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 PNRC1Q12796 327 aaPredicted RBP3.34□□□□□ -1.87
RFC4-213ENST00000489028 GAGE2BQ13066 116 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 GAGE2EQ4V326 116 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 ASPRV1Q53RT3 343 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 GAGE2AQ6NT46 116 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 AACSQ86V21 672 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 ADGRF2Q8IZF7 708 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 TEX19Q8NA77 164 aa3.34□□□□□ -1.87
RFC4-213ENST00000489028 ADAD2Q8NCV1 583 aaKnown RBP3.34□□□□□ -1.87
RFC4-213ENST00000489028 TAF15Q92804 592 aaKnown RBP eCLIP3.34□□□□□ -1.87
RFC4-213ENST00000489028 CHCHD6Q9BRQ6 235 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms