RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DNPEPQ9ULA0 475 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ICKQ9UPZ9 632 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CARD8Q9Y2G2 431 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 POLR2AP24928 1970 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 A0A0B4J293 547 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 FEZF1A0PJY2 475 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 MYADML2A6NDP7 307 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 L7N2F9 121 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PSMD9O00233 223 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PRYO14603 147 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SMAD9O15198 467 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SLC16A3O15427 465 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 NUDT21O43809 227 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 GMFGO60234 142 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 GPC4O75487 556 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 JRKO75564 520 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PRDM1O75626 825 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 RSL1D1O76021 490 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 KIAA0754O94854 1291 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SLITRK3O94933 977 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 OR6B1O95007 311 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 TJP3O95049 919 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 VNN2O95498 520 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 HLA-DQA2P01906 255 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ELANEP08246 267 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 RFPL3SP0C7P2 107 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 DANCRP0C864 163 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 THRBP10828 461 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 FCGR2AP12318 317 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 NDUFS1P28331 727 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 HOXD9P28356 352 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 APOBEC3AP31941 199 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PTGER1P34995 402 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 LIPAP38571 399 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 WNT5AP41221 380 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 CENPAP49450 140 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SERPINH1P50454 418 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 UBE2HP62256 183 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SLC18A2Q05940 514 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 DMTNQ08495 405 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 DMWDQ09019 674 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PDZK1IP1Q13113 114 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 RESTQ13127 1097 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SNX1Q13596 522 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PPP1R7Q15435 360 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ZKSCAN8Q15776 578 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 IMMTQ16891 758 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SOWAHAQ2M3V2 549 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 CD300EQ496F6 205 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 IQCCQ4KMZ1 466 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 HSP90AB3PQ58FF7 597 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ATAD3BQ5T9A4 648 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 RAET1GQ6H3X3 334 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ANGPTL8Q6UXH0 198 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 Q6YL49 198 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 CCDC83Q8IWF9 413 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF679Q8IYX0 411 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 LCORLQ8N3X6 602 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 OR56A1Q8NGH5 318 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 OR13C2Q8NGS9 318 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 NCOA7Q8NI08 942 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 METTL21AQ8WXB1 218 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 IP6K1Q92551 441 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ARHGAP45Q92619 1136 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 IGSF8Q969P0 613 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 MOAP1Q96BY2 351 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 RNF31Q96EP0 1072 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 EPSTI1Q96J88 318 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 EGLN2Q96KS0 407 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 NSMCE2Q96MF7 247 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 TCEANC2Q96MN5 208 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF560Q96MR9 790 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 GPR78Q96P69 363 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SLITRK1Q96PX8 696 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 TEFMQ96QE5 360 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PANX3Q96QZ0 392 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM47Q9BQJ4 181 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM79Q9BSE2 394 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ZSCAN5AQ9BUG6 496 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 EDEM2Q9BV94 578 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 TEX13AQ9BXU3 409 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 FRMD8Q9BZ67 464 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 PUS3Q9BZE2 481 aaKnown RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 RAB33BQ9H082 229 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 THAP2Q9H0W7 228 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 EQTNQ9NQ60 294 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 ARL15Q9NXU5 204 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SMPD3Q9NY59 655 aaPredicted RBP3.35□□□□□ -1.87
PRPF4-203ENST00000488937 OR6C3Q9NZP0 311 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 CTNNAL1Q9UBT7 734 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 POLLQ9UGP5 575 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 KCNE5Q9UJ90 142 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 FZD4Q9ULV1 537 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SH2B3Q9UQQ2 575 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 KCNK6Q9Y257 313 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 FAM96BQ9Y3D0 163 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 NAALAD2Q9Y3Q0 740 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 SPATA31A1Q5TZJ5 1347 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 MROH5Q6ZUA9 1318 aa3.35□□□□□ -1.87
PRPF4-203ENST00000488937 NCAPD2Q15021 1401 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms