RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 FOXR1Q6PIV2 292 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 SYT10Q6XYQ8 523 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 USP53Q70EK8 1073 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 RAB11FIP2Q7L804 512 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 PLXDC1Q8IUK5 500 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 OR4D9Q8NGE8 314 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 GSDMBQ8TAX9 411 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 C12orf66Q96MD2 445 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 SERPINB12Q96P63 405 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 RDH14Q9HBH5 336 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 THSD1Q9NS62 852 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 IMP3Q9NV31 184 aaKnown RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 ATXN7L1Q9ULK2 861 aaPredicted RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 VPS9D1Q9Y2B5 631 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 MAD1L1Q9Y6D9 718 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 AKAP13Q12802 2813 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 KNTC1P50748 2209 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 KIF2AO00139 706 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 DNALI1O14645 258 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 LIN7AO14910 233 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 HGSO14964 777 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 AVILO75366 819 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 NDUFS3O75489 264 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 TMEM63AO94886 807 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 VAPBO95292 243 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 POLBP06746 335 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 PRSS56P0CW18 603 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 CD1CP29017 333 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 CA5AP35218 305 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 RPA4Q13156 261 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 TMED2Q15363 201 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 NKAIN2Q5VXU1 208 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 ANKRD22Q5VYY1 191 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 IZUMO3Q5VZ72 239 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 PTRHD1Q6GMV3 140 aaKnown RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 WDR74Q6RFH5 385 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 TMEM26Q6ZUK4 368 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 MAATS1Q7Z4T9 603 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 LRRC6Q86X45 466 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 ZNF761Q86XN6 746 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 C17orf53Q8N3J3 647 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 FBXO39Q8N4B4 442 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 CLDN19Q8N6F1 224 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 MDM1Q8TC05 714 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 NCSTNQ92542 709 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 ELMO1Q92556 727 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 ZNF778Q96MU6 729 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 WWP1Q9H0M0 922 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 SLC40A1Q9NP59 571 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 SCHIP1Q9P0W5 487 aaPredicted RBP12.63□□□□□ -0.39
PHF1-210ENST00000488767 GNPTGQ9UJJ9 305 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 SATB2Q9UPW6 733 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 PCDHGA8Q9Y5G5 932 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 BPTFQ12830 3046 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 SPEGQ15772 3267 aa12.63□□□□□ -0.39
PHF1-210ENST00000488767 IGF2RP11717 2491 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 FAM237BA0A1B0GVD1 139 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 PRR19A6NJB7 356 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 PLD2O14939 933 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 RRP8O43159 456 aaKnown RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 KDM1AO60341 852 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 BRINP1O60477 761 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 UBXN7O94888 489 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 MTHFD1P11586 935 aaKnown RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 BRAFP15056 766 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 NMBRP28336 390 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 CSTF2P33240 577 aaKnown RBP eCLIP12.62□□□□□ -0.39
PHF1-210ENST00000488767 SLC19A1P41440 591 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 LIMK2P53671 638 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 CLCA4Q14CN2 919 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 MORF4L2Q15014 288 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 RPE65Q16518 533 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 RNASEH2BQ5TBB1 312 aaKnown RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 KIAA0930Q6ICG6 404 aaPredicted RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 TMEM71Q6P5X7 295 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 ZNF572Q7Z3I7 529 aaPredicted RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 B3GNT8Q7Z7M8 397 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 CAND1Q86VP6 1230 aaKnown RBP12.62□□□□□ -0.39
PHF1-210ENST00000488767 PROSER1Q86XN7 944 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 JAMLQ86YT9 394 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 PDIK1LQ8N165 341 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 NAT8LQ8N9F0 302 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 ZFPM2Q8WW38 1151 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
PHF1-210ENST00000488767 C16orf45Q96MC5 204 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms